RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PAWRQ96IZ0 340 aaKnown RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 CASD1Q96PB1 797 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 BCL2L14Q9BZR8 327 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 METTL17Q9H7H0 456 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 NT5MQ9NPB1 228 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 ACER3Q9NUN7 267 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 NLE1Q9NVX2 485 aaPredicted RBP18.16■□□□□ 0.5
HMGA1-205ENST00000447654 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 GPR160Q9UJ42 338 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 PCDHB11Q9Y5F2 797 aa18.16■□□□□ 0.5
HMGA1-205ENST00000447654 A0A0G2JPF8 293 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 TCRBV16S1A1N1A0A5B0 115 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 CARNS1A5YM72 827 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 HNRNPCL3B7ZW38 293 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 WRBO00258 174 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 S100A9P06702 114 aaKnown RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 GIPP09681 153 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 HNRNPCL4P0DMR1 293 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 OSMP13725 252 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 ELK1P19419 428 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PSMA3P25788 255 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PITPNBP48739 271 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PTPRCAPQ14761 206 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 TAF1AQ15573 450 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PTPRNQ16849 979 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 RTP2Q5QGT7 225 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 MARC1Q5VT66 337 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PYHIN1Q6K0P9 492 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 CASP12Q6UXS9 341 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 ASB18Q6ZVZ8 466 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 IKBIPQ70UQ0 350 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 JAZF1Q86VZ6 243 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 TMEM17Q86X19 198 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 TEX26Q8N6G2 289 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 C11orf65Q8NCR3 313 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 RPLP0P6Q8NHW5 317 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 IGSF8Q969P0 613 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 ELMOD3Q96FG2 381 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 CACNG6Q9BXT2 260 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 LATS2Q9NRM7 1088 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 MRPS18AQ9NVS2 196 aaKnown RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 ZNF624Q9P2J8 865 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 SEC14L3Q9UDX4 400 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 SGCEO43556 437 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 HLA-DPB1P04440 258 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PPP3CBP16298 524 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 CXCL2P19875 107 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PRPS1L1P21108 318 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 SLC11A1P49279 550 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 MAZP56270 477 aaKnown RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 FABP5Q01469 135 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PUM1Q14671 1186 aaKnown RBP eCLIP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 GRIN2CQ14957 1233 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 METTL11BQ5VVY1 283 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 C12orf40Q86WS4 652 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 CIR1Q86X95 450 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 C12orf45Q8N5I9 185 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 AQP11Q8NBQ7 271 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 OR52I1Q8NGK6 324 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 ZDHHC1Q8WTX9 485 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 HMCESQ96FZ2 354 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 SLC6A18Q96N87 628 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 KLHL5Q96PQ7 755 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 IL4I1Q96RQ9 567 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PRDM5Q9NQX1 630 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 DNAJC11Q9NVH1 559 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 DNAJC27Q9NZQ0 273 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 UXTQ9UBK9 157 aaPredicted RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 TESQ9UGI8 421 aaKnown RBP18.15■□□□□ 0.5
HMGA1-205ENST00000447654 PCOLCE2Q9UKZ9 415 aa18.15■□□□□ 0.5
HMGA1-205ENST00000447654 MCRIP1C9JLW8 97 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 GJB3O75712 270 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 AQP8O94778 261 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 HPP00738 406 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 GLAP06280 429 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 S100A11P31949 105 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 XCR1P46094 333 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 TBX4P57082 545 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 RAP2BP61225 183 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 MAXP61244 160 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ITKQ08881 620 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 TAF10Q12962 218 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 HEPACAMQ14CZ8 416 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ELP2Q6IA86 826 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 FAM26EQ8N5C1 309 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 GPR26Q8NDV2 337 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 MDGA1Q8NFP4 955 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OR5M9Q8NGP3 310 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OR52J3Q8NH60 311 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ELP5Q8TE02 316 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 UBTD2Q8WUN7 234 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 HSD17B8Q92506 261 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 GTPBP3Q969Y2 492 aaKnown RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SEMA4CQ9C0C4 833 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SPRTNQ9H040 489 aaPredicted RBP18.14■□□□□ 0.49
HMGA1-205ENST00000447654 SLC25A32Q9H2D1 315 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OR51M1Q9H341 326 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 OSGEPL1Q9H4B0 414 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 DLGAP4Q9Y2H0 992 aa18.14■□□□□ 0.49
HMGA1-205ENST00000447654 ARL5AQ9Y689 179 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms