RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 A0A087WV62 115 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 PLOD2O00469 737 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 SDHDO14521 159 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 TP53I11O14683 189 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ACOX3O15254 700 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 P04436 131 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 IFI6P09912 130 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 PPICP45877 212 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 GPR85P60893 370 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ALDH6A1Q02252 535 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 NNATQ16517 81 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ZNF551Q7Z340 670 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 WDR75Q8IWA0 830 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 CPSF7Q8N684 471 aaKnown RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 KRTCAP2Q8N6L1 136 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 NATD1Q8N6N6 113 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 OR7A2PQ8NGA2 310 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ELP4Q96EB1 424 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 HSPBAP1Q96EW2 488 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 MAGED4Q96JG8 741 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 C7orf26Q96N11 449 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 FRMD6Q96NE9 622 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 SLX1AQ9BQ83 275 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ANKRA2Q9H9E1 313 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ACSS1Q9NUB1 689 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 C19orf53Q9UNZ5 99 aaPredicted RBP16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 NPFFR2Q9Y5X5 522 aa16.1■□□□□ 0.17
SMARCAL1-209ENST00000444508 ANKUB1A6NFN9 424 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 ZNF24P17028 368 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 DRD5P21918 477 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 GNLYP22749 145 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 DIO3P55073 304 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 CLDN8P56748 225 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 PSPHP78330 225 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 ZNF155Q12901 538 aaPredicted RBP16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 RPS6KA2Q15349 733 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 HSP90B2PQ58FF3 399 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 FHL5Q5TD97 284 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 SLC22A10Q63ZE4 541 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 ZNF324BQ6AW86 544 aaPredicted RBP16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 OGFOD2Q6N063 350 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 LYPD8Q6UX82 237 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 TMEM64Q6YI46 380 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 FAM47EQ6ZV65 393 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 LARP4Q71RC2 724 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 OR2L13Q8N349 312 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 ST6GALNAC3Q8NDV1 305 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 OR5M3Q8NGP4 307 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 DPY30Q9C005 99 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 FOLH1BQ9HBA9 442 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 SVILO95425 2214 aa16.09■□□□□ 0.17
SMARCAL1-209ENST00000444508 GOLGA8QA0A0J9YX86 632 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 GOLGA8OA6NCC3 632 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 FRG2CA6NGY1 282 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 GOLGA8NF8WBI6 632 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 G3V3Y1 287 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 UPK1AO00322 258 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 ERN1O75460 977 aaKnown RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 CBX6O95503 412 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 CCL3P10147 92 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 LAMP1P11279 417 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 NAGAP17050 411 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 CNR1P21554 472 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 ABCD3P28288 659 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 EPHA3P29320 983 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 FRKP42685 505 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 UQCRFS1P47985 274 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 C21orf58P58505 322 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 RPP38P78345 283 aaKnown RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 PLCXD2Q0VAA5 305 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 MRPL49Q13405 166 aaKnown RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 ZNHIT3Q15649 155 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 NTRK2Q16620 822 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 NXNQ6DKJ4 435 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 GK5Q6ZS86 529 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 SPATA19Q7Z5L4 167 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 RIMKLAQ8IXN7 391 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 PRR22Q8IZ63 422 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 OR10G3Q8NGC4 313 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 PAQR8Q8TEZ7 354 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 VSTM2LQ96N03 204 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 BTBD9Q96Q07 612 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 FAM173AQ9BQD7 235 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 CLMPQ9H6B4 373 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 WDR55Q9H6Y2 383 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 CNIH4Q9P003 139 aa16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 GPR55Q9Y2T6 319 aaPredicted RBP16.08■□□□□ 0.16
SMARCAL1-209ENST00000444508 A0A1W2PRB8 838 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 PPM1BO75688 479 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 EFNA1P20827 205 aaPredicted RBP16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 MST1P26927 711 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 TDGF1P3P51864 188 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 FBXW4P57775 412 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 PLGLB1Q02325 96 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 MLC1Q15049 377 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 PGS1Q32NB8 556 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 LSM12Q3MHD2 195 aaKnown RBP16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 SZRD1Q7Z422 152 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 SLC34A3Q8N130 599 aa16.07■□□□□ 0.16
SMARCAL1-209ENST00000444508 FBXW8Q8N3Y1 598 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms