RNA–Protein interactions for RNA: ENST00000443967.5

SIMC1-205, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-205ENST00000443967 PCDH7O60245 1069 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 PRAMEF4O60810 478 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 C8GP07360 202 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 RYKP34925 604 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 CLCNKAP51800 687 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 PRMT2P55345 433 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 FADDQ13158 208 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 TCTN1Q2MV58 587 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 PRAMEF9Q5VWM5 478 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 AGTRAPQ6RW13 159 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 HMGN2P46Q86SG4 172 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 TRAPPC5Q8IUR0 188 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 ZZZ3Q8IYH5 903 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 FTMTQ8N4E7 242 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 ATP6V1C2Q8NEY4 427 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 NFKBIDQ8NI38 313 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
SIMC1-205ENST00000443967 CXorf58Q96LI9 332 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
SIMC1-205ENST00000443967 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 ELP6Q0PNE2 266 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 IL18Q14116 193 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 TRAM2Q15035 370 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SLC6A19Q695T7 634 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SLC8B1Q6J4K2 584 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 PAQR7Q86WK9 346 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 LGI4Q8N135 537 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SSX3Q99909 188 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 RLIMQ9NVW2 624 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 FKBP7Q9Y680 259 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 LOC105369274A0A096LPK9 316 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 GABRR3A8MPY1 467 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 H3BN98 237 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 KPNA3O00505 521 aaPredicted RBP13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SLC16A6O15403 523 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 TSPAN6O43657 245 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SSNA1O43805 119 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 TPST2O60704 377 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 C6orf47O95873 294 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 TPOP07202 933 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 SYPP08247 313 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 NR2C1P13056 603 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 ZXDCQ2QGD7 858 aaPredicted RBP13.79□□□□□ -0.2
SIMC1-205ENST00000443967 HFEQ30201 348 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 ZNF852Q6ZMS4 543 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 NLRC3Q7RTR2 1065 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 RDH10Q8IZV5 341 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 OR4N4Q8N0Y3 316 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 C11orf65Q8NCR3 313 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 C11orf16Q9NQ32 467 aa13.79□□□□□ -0.2
SIMC1-205ENST00000443967 CCDC85CA6NKD9 419 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 EIF3GO75821 320 aaKnown RBP eCLIP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CXCL14O95715 111 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CATP04040 527 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CCL5P13501 91 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 PRG2P13727 222 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 RPS26P62854 115 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 LURAP1Q96LR2 239 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 PKP4Q99569 1192 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 MAP3K3Q99759 626 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SLC12A9Q9BXP2 914 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 ZCCHC4Q9H5U6 513 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CTPS2Q9NRF8 586 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 RUVBL1Q9Y265 456 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CCDC88CQ9P219 2028 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 VCANP13611 3396 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 DOCK6Q96HP0 2047 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 YY2O15391 372 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SIGLEC6O43699 453 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SOX14O95416 240 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SLC16A8O95907 504 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CSF3P09919 207 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 MAPK8P45983 427 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CRISP3P54108 245 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 LRRC32Q14392 662 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 GBX1Q14549 363 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 C22orf39Q6P5X5 142 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 DPPA2Q7Z7J5 298 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 ENTHD1Q8IYW4 607 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SFT2D1Q8WV19 159 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SCRN2Q96FV2 425 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 SPSB2Q99619 263 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 MED18Q9BUE0 208 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CWH43Q9H720 699 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 MIEF1Q9NQG6 463 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 PRDM9Q9NQV7 894 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 INSL5Q9Y5Q6 135 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 EDN3P14138 238 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 FEN1P39748 380 aaKnown RBP13.78□□□□□ -0.2
SIMC1-205ENST00000443967 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
SIMC1-205ENST00000443967 MPPE1Q53F39 396 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms