RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SP140Q13342 867 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ZBTB6Q15916 424 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 FAM74A3Q4VXF1 159 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ALG1LQ6GMV1 187 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 UBE2R2Q712K3 238 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 FAM71CQ8NEG0 241 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RTP3Q9BQQ7 232 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 DLEC1Q9Y238 1755 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ESPL1Q14674 2120 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 MEIKINA0A087WXM9 373 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 FAM227AF5H4B4 570 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 FZD7O75084 574 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 GJB3O75712 270 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SIX6O95475 246 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TBX18O95935 607 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CFDP00746 253 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 HOXC13P31276 330 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RAD52P43351 418 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CRB2Q5IJ48 1285 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RAB12Q6IQ22 244 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CCDC107Q8WV48 283 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 NOX3Q9HBY0 568 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TMEM184CQ9NVA4 438 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SLC22A23A1A5C7 686 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RAB19A4D1S5 217 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 OR2AT4A6NND4 320 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RIIAD1A6NNX1 92 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RNASET2O00584 256 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 SCN2BO60939 215 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 C8GP07360 202 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 AMD1P17707 334 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 UQCRC2P22695 453 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CHRNA6Q15825 494 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ETFDHQ16134 617 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 YARS2Q9Y2Z4 477 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 PCDHGC4Q9Y5F7 938 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 KIAA0100Q14667 2235 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 A0A1B0GUL6 1792 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TXNL1O43396 289 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CREBL2O60519 120 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 ETFAP13804 333 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 HOXB3P14651 431 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 PTPN6P29350 595 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 MANFP55145 182 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 HLXQ14774 488 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 P2RY14Q15391 338 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 UAP1L1Q3KQV9 507 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SLC25A30Q5SVS4 291 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CDCP1Q9H5V8 836 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 KRCC1Q9NPI7 259 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 CDV3Q9UKY7 258 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 ZNF214Q9UL59 606 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 RFXAPO00287 272 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ABCD4O14678 606 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 VIPR1P32241 457 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 HAAOP46952 286 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 YBEYP58557 167 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 SYTL3Q4VX76 610 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 MCATQ8IVS2 390 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 CFAP52Q8N1V2 620 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 UBE2E3Q969T4 207 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CNTNAP3BQ96NU0 1288 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 AP5M1Q9H0R1 490 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ACP2P11117 423 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TAF13Q15543 124 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CLDN19Q8N6F1 224 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ARL5BQ96KC2 179 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TEPSINQ96N21 525 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SPATA5L1Q9BVQ7 753 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 FBXW2Q9UKT8 454 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 NAP1L6A6NFF2 107 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 MPTX1A8MV57 137 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 A8MVJ9 347 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 EIF4EP06730 217 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 ACADLP28330 430 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 SLC3A1Q07837 685 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 KLBQ86Z14 1044 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CLECL1Q8IZS7 167 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ATOH1Q92858 354 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 YIPF4Q9BSR8 244 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ATG10Q9H0Y0 220 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ISYNA1Q9NPH2 558 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 PRAMEF2O60811 474 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 RNF144AP50876 292 aaPredicted RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 DGCR2P98153 550 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CRHR2Q13324 411 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 KRT77Q7Z794 578 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 LINC00471Q8N535 108 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 OR11H7Q8NGC8 314 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 OR4K1Q8NGD4 311 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 GANCQ8TET4 914 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 DNAJB3Q8WWF6 145 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 TRAPPC13A5PLN9 417 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 C2orf74A8MZ97 194 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 ANKRD66B4E2M5 251 aa4.76□□□□□ -1.65
HERC1-201ENST00000443617 GATCO43716 136 aaKnown RBP4.76□□□□□ -1.65
HERC1-201ENST00000443617 FAUP35544 74 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms