RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 HIST1H2AJQ99878 128 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 H2AFJQ9BTM1 129 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 DPCDQ9BVM2 203 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 CLEC4MQ9H2X3 399 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 GHITMQ9H3K2 345 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 C1GALT1Q9NS00 363 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 UCKL1Q9NWZ5 548 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ZDHHC3Q9NYG2 299 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ZNF222Q9UK12 451 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 OR51B4Q9Y5P0 310 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 MYO15AQ9UKN7 3530 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 TRBV4-1A0A0J9YWV2 114 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 TRDV1A0A1B0GX56 115 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 GTPBP1O00178 669 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 RFXAPO00287 272 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 TOR1AO14656 332 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SLC19A2O60779 497 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 PSIP1O75475 530 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 SOX14O95416 240 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 GAAP10253 952 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ICAM2P13598 275 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 PRKACAP17612 351 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 AVPR1BP47901 424 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 CASP9P55211 416 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ERVK-21P61565 698 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 FABP5Q01469 135 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 HSF2Q03933 536 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 DSG2Q14126 1118 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 FGFBP1Q14512 234 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SNAPC1Q16533 368 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ZNF630Q2M218 657 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 CD276Q5ZPR3 534 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 RETSATQ6NUM9 610 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 LUZP2Q86TE4 346 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 ADGRF3Q8IZF5 1079 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 OR11H7Q8NGC8 314 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 OR8K5Q8NH50 307 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 UFD1Q92890 307 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 RBPMSQ93062 196 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 SENP5Q96HI0 755 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 SLCO1C1Q9NYB5 712 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 TAS2R7Q9NYW3 318 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SLC22A14Q9Y267 594 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 TMEM129A0AVI4 362 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 PIPSLA2A3N6 862 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 H3BN98 237 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 FFAR1O14842 300 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 CLDN7O95471 211 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 RECKO95980 971 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SOD1P00441 154 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 IFNA16P05015 189 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 OR56A5P0C7T3 313 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 CFL1P23528 166 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 AP1S2P56377 157 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 CTBP2P56545 445 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 PCBP3P57721 371 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 RAB14P61106 215 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 RAE1P78406 368 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 RPA4Q13156 261 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 LRRC32Q14392 662 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SF1Q15637 639 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 LIPJQ5W064 366 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ASTLQ6HA08 431 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 KIAA1324Q6UXG2 1013 aaKnown RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 ADGRG2Q8IZP9 1017 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 OXR1Q8N573 874 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 WDR20Q8TBZ3 569 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 HGDQ93099 445 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ALG14Q96F25 216 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 LYSMD1Q96S90 227 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 C2orf49Q9BVC5 232 aaPredicted RBP11.25□□□□□ -0.61
LTBR-203ENST00000441074 ZNF576Q9H609 170 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ERVMER34-1Q9H9K5 563 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
LTBR-203ENST00000441074 ANXA4P09525 319 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 HNF1BP35680 557 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 CCT3P49368 545 aaKnown RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 LMAN2Q12907 356 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 LGALSLQ3ZCW2 172 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 BCL2L15Q5TBC7 163 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 TRIM40Q6P9F5 258 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 POLDIP3Q9BY77 421 aaKnown RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 BHLHE41Q9C0J9 482 aaPredicted RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 POLR2J3Q9H1A7 115 aaKnown RBP11.24□□□□□ -0.61
LTBR-203ENST00000441074 ZC4H2Q9NQZ6 224 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 KIAA1671Q9BY89 1806 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 MGAT4DA6NG13 374 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 TUBAL3A6NHL2 446 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 EPOPA6NHQ4 379 aa11.24□□□□□ -0.61
LTBR-203ENST00000441074 NEDD8-MDP1E9PL57 170 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms