RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 TARDBPQ13148 414 aaKnown RBP eCLIP7.46□□□□□ -1.21
APP-209ENST00000440126 CCINQ13939 588 aa7.46□□□□□ -1.21
APP-209ENST00000440126 LASP1Q14847 261 aaKnown RBP7.46□□□□□ -1.21
APP-209ENST00000440126 CCDC85BQ15834 202 aaPredicted RBP7.46□□□□□ -1.21
APP-209ENST00000440126 TMEM107Q6UX40 140 aa7.46□□□□□ -1.21
APP-209ENST00000440126 C6orf120Q7Z4R8 191 aa7.46□□□□□ -1.21
APP-209ENST00000440126 OXR1Q8N573 874 aa7.46□□□□□ -1.21
APP-209ENST00000440126 OR10G2Q8NGC3 310 aa7.46□□□□□ -1.21
APP-209ENST00000440126 OR4D11Q8NGI4 311 aa7.46□□□□□ -1.21
APP-209ENST00000440126 DNAJB8Q8NHS0 232 aa7.46□□□□□ -1.21
APP-209ENST00000440126 LCN9Q8WX39 176 aa7.46□□□□□ -1.21
APP-209ENST00000440126 ELSPBP1Q96BH3 223 aa7.46□□□□□ -1.21
APP-209ENST00000440126 MRGPRX1Q96LB2 322 aa7.46□□□□□ -1.21
APP-209ENST00000440126 COL21A1Q96P44 957 aa7.46□□□□□ -1.21
APP-209ENST00000440126 CDADC1Q9BWV3 514 aa7.46□□□□□ -1.21
APP-209ENST00000440126 GON7Q9BXV9 100 aa7.46□□□□□ -1.21
APP-209ENST00000440126 WDR12Q9GZL7 423 aaKnown RBP7.46□□□□□ -1.21
APP-209ENST00000440126 S1PR5Q9H228 398 aa7.46□□□□□ -1.21
APP-209ENST00000440126 CPNE5Q9HCH3 593 aa7.46□□□□□ -1.21
APP-209ENST00000440126 DIABLOQ9NR28 239 aa7.46□□□□□ -1.21
APP-209ENST00000440126 TMEM9Q9P0T7 183 aa7.46□□□□□ -1.21
APP-209ENST00000440126 CAB39Q9Y376 341 aaPredicted RBP7.46□□□□□ -1.21
APP-209ENST00000440126 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.21
APP-209ENST00000440126 A0A1W2PR48 441 aa7.46□□□□□ -1.22
APP-209ENST00000440126 GSAPA4D1B5 854 aa7.46□□□□□ -1.22
APP-209ENST00000440126 LRIT2A6NDA9 550 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ANHXE9PGG2 379 aa7.46□□□□□ -1.22
APP-209ENST00000440126 PLRG1O43660 514 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 SLC28A2O43868 658 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SEMA7AO75326 666 aa7.46□□□□□ -1.22
APP-209ENST00000440126 RECKO95980 971 aa7.46□□□□□ -1.22
APP-209ENST00000440126 HPRP00739 348 aa7.46□□□□□ -1.22
APP-209ENST00000440126 LCKP06239 509 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ACADMP11310 421 aa7.46□□□□□ -1.22
APP-209ENST00000440126 IFI30P13284 250 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SELLP14151 372 aa7.46□□□□□ -1.22
APP-209ENST00000440126 IL1RNP18510 177 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CCNA2P20248 432 aa7.46□□□□□ -1.22
APP-209ENST00000440126 PSMB9P28065 219 aa7.46□□□□□ -1.22
APP-209ENST00000440126 HTR1BP28222 390 aa7.46□□□□□ -1.22
APP-209ENST00000440126 C21orf33P30042 268 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 LIM2P55344 173 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ITGA1P56199 1179 aa7.46□□□□□ -1.22
APP-209ENST00000440126 AQP6Q13520 282 aa7.46□□□□□ -1.22
APP-209ENST00000440126 PUM1Q14671 1186 aaKnown RBP eCLIP7.46□□□□□ -1.22
APP-209ENST00000440126 IFI44LQ53G44 452 aa7.46□□□□□ -1.22
APP-209ENST00000440126 RSBN1Q5VWQ0 802 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 KDM4DQ6B0I6 523 aa7.46□□□□□ -1.22
APP-209ENST00000440126 TRIM40Q6P9F5 258 aa7.46□□□□□ -1.22
APP-209ENST00000440126 MSANTD1Q6ZTZ1 278 aa7.46□□□□□ -1.22
APP-209ENST00000440126 BCDIN3DQ7Z5W3 292 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 NUDT13Q86X67 352 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ZNF540Q8NDQ6 660 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SETD7Q8WTS6 366 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 RPL3LQ92901 407 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 NODALQ96S42 347 aa7.46□□□□□ -1.22
APP-209ENST00000440126 TMEM246Q9BRR3 403 aa7.46□□□□□ -1.22
APP-209ENST00000440126 GLIPR2Q9H4G4 154 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SLA2Q9H6Q3 261 aa7.46□□□□□ -1.22
APP-209ENST00000440126 EPS8L2Q9H6S3 715 aa7.46□□□□□ -1.22
APP-209ENST00000440126 HMG20AQ9NP66 347 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SIRT3Q9NTG7 399 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 ZCCHC3Q9NUD5 404 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 TAS2R7Q9NYW3 318 aa7.46□□□□□ -1.22
APP-209ENST00000440126 USE1Q9NZ43 259 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ZNF624Q9P2J8 865 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 APOBEC3BQ9UH17 382 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 GMEB2Q9UKD1 530 aa7.46□□□□□ -1.22
APP-209ENST00000440126 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.46□□□□□ -1.22
APP-209ENST00000440126 A0A0G2JMP0 313 aa7.46□□□□□ -1.22
APP-209ENST00000440126 TRBV4-1A0A0J9YWV2 114 aa7.46□□□□□ -1.22
APP-209ENST00000440126 NOL3O60936 208 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 ABCB7O75027 752 aa7.46□□□□□ -1.22
APP-209ENST00000440126 MFN2O95140 757 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CTSBP07858 339 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CHRM5P08912 532 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 C7P10643 843 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CSTF2P33240 577 aaKnown RBP eCLIP7.46□□□□□ -1.22
APP-209ENST00000440126 CCT3P49368 545 aaKnown RBP7.46□□□□□ -1.22
APP-209ENST00000440126 PPM1FP49593 454 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 BTN3A2P78410 334 aa7.46□□□□□ -1.22
APP-209ENST00000440126 EMX1Q04741 257 aaPredicted RBP7.46□□□□□ -1.22
APP-209ENST00000440126 NPRL3Q12980 569 aa7.46□□□□□ -1.22
APP-209ENST00000440126 RPA4Q13156 261 aa7.46□□□□□ -1.22
APP-209ENST00000440126 VEZF1Q14119 521 aa7.46□□□□□ -1.22
APP-209ENST00000440126 SYT16Q17RD7 645 aa7.46□□□□□ -1.22
APP-209ENST00000440126 PRRT3Q5FWE3 981 aa7.46□□□□□ -1.22
APP-209ENST00000440126 OR4C11Q6IEV9 310 aa7.46□□□□□ -1.22
APP-209ENST00000440126 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
APP-209ENST00000440126 PRSS41Q7RTY9 318 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CAMKMTQ7Z624 323 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ARMC8Q8IUR7 673 aa7.46□□□□□ -1.22
APP-209ENST00000440126 ARL6IP6Q8N6S5 226 aa7.46□□□□□ -1.22
APP-209ENST00000440126 OR2L3Q8NG85 312 aa7.46□□□□□ -1.22
APP-209ENST00000440126 GPR32P1Q8NGA4 272 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CREB3L4Q8TEY5 395 aa7.46□□□□□ -1.22
APP-209ENST00000440126 CHAC2Q8WUX2 184 aa7.46□□□□□ -1.22
APP-209ENST00000440126 DNASE1L2Q92874 299 aa7.46□□□□□ -1.22
APP-209ENST00000440126 UBE2E3Q969T4 207 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms