RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 C8BP07358 591 aa13.13□□□□□ -0.31
LRCH3-206ENST00000438796 ZNF14P17017 642 aaPredicted RBP13.13□□□□□ -0.31
LRCH3-206ENST00000438796 ZNF136P52737 540 aa13.13□□□□□ -0.31
LRCH3-206ENST00000438796 PSD4Q8NDX1 1056 aa13.13□□□□□ -0.31
LRCH3-206ENST00000438796 C8orf33Q9H7E9 229 aaPredicted RBP13.13□□□□□ -0.31
LRCH3-206ENST00000438796 MYH13Q9UKX3 1938 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CRTAPO75718 401 aaPredicted RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 MRPL21Q7Z2W9 205 aaKnown RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 HORMAD2Q8N7B1 307 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SFXN2Q96NB2 322 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SUSD2Q9UGT4 822 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 PSAT1Q9Y617 370 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 C2orf72A6NCS6 295 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NUDT21O43809 227 aaKnown RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 GDF1P27539 372 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 TIA1P31483 386 aaKnown RBP eCLIP13.12□□□□□ -0.316e-7■■■■■ 29.1
LRCH3-206ENST00000438796 CD70P32970 193 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CDKN3Q16667 212 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 FAM217AQ8IXS0 508 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SYT4Q9H2B2 425 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CD320Q9NPF0 282 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NKX1-2Q9UD57 310 aaPredicted RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 OR5K4A6NMS3 321 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 GJE1A6NN92 205 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 PYCR1P32322 319 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SCAPQ12770 1279 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CYP1B1Q16678 543 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SLC18B1Q6NT16 456 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NPIPA5A0A0B4J1W7 369 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 C1orf226A1L170 272 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NPIPA7E9PJI5 369 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 F10P00742 488 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NPIPA8P0DM63 369 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 PLBD1Q6P4A8 553 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 KLHDC8AQ8IYD2 350 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 NANOGQ9H9S0 305 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 GPRC5BQ9NZH0 403 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 HMX3A6NHT5 357 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 DLGAP1O14490 977 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 HES5Q5TA89 166 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 ATOH1Q92858 354 aaPredicted RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 CNN2Q99439 309 aaKnown RBP13.12□□□□□ -0.31
LRCH3-206ENST00000438796 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 SYNPO2LQ9H987 977 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 KLHL21Q9UJP4 597 aa13.12□□□□□ -0.31
LRCH3-206ENST00000438796 GSRP00390 522 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 FESP07332 822 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 C5AR1P21730 350 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 OR7A5Q15622 319 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 PSAPL1Q6NUJ1 521 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 IQCF1Q8N6M8 205 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 SLC35B2Q8TB61 432 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 MEIS3P1A6NDR6 274 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 FZD9O00144 591 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 STC2O76061 302 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 LIPIQ6XZB0 460 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 KBTBD6Q86V97 674 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 POC1BQ8TC44 478 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 FOXJ1Q92949 421 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 ZNF689Q96CS4 500 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 IGKV6D-41A0A0C4DH26 115 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 PMM2O15305 246 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 PROS1P07225 676 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 ETFAP13804 333 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 EIF2B1Q14232 305 aaKnown RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 TMEM139Q8IV31 216 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 CHST14Q8NCH0 376 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 SLC19A2O60779 497 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 GABRR1P24046 479 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 WDR53Q7Z5U6 358 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 TMEM184CQ9NVA4 438 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 LSM5Q9Y4Y9 91 aaKnown RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 GPR37L1O60883 481 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 F2P00734 622 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 UGT2B10P36537 528 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 ELAVL3Q14576 367 aaKnown RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 RAB11BQ15907 218 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 LRRC18Q8N456 261 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 OR5H2Q8NGV7 314 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 TP63Q9H3D4 680 aaPredicted RBP13.11□□□□□ -0.31
LRCH3-206ENST00000438796 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
LRCH3-206ENST00000438796 OR6C6A6NF89 314 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms