RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TSGA13Q96PP4 275 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 MCHR1Q99705 422 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ZDHHC7Q9NXF8 308 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 C9J4A7 227 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SNCGO76070 127 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 RAB3DO95716 219 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 RAB40ALP0C0E4 278 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 AWAT2Q6E213 333 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF439Q8NDP4 499 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 GLIS3Q8NEA6 775 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 IL31RAQ8NI17 732 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 BRIX1Q8TDN6 353 aaKnown RBP11.03□□□□□ -0.64
PTCH1-209ENST00000437951 RAB40AQ8WXH6 277 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SLC6A17Q9H1V8 727 aa11.03□□□□□ -0.64
PTCH1-209ENST00000437951 SRPX2O60687 465 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 TLE1Q04724 770 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 BAK1Q16611 211 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 C2CD4AQ8NCU7 369 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 PXT1Q8NFP0 134 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 ACDQ96AP0 544 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 LRR1Q96L50 414 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 DEC1Q9P2X7 70 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 LSM5Q9Y4Y9 91 aaKnown RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 ZFP37Q9Y6Q3 630 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 STSP08842 583 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 SPATA31D3P0C874 917 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 IL13RA1P78552 427 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 ARHGAP19Q14CB8 494 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 RNF212Q495C1 297 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 ZNF704Q6ZNC4 412 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 ASRGL1Q7L266 308 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 TPRA1Q86W33 373 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 UHRF1Q96T88 793 aaPredicted RBP11.02□□□□□ -0.64
PTCH1-209ENST00000437951 PIGMQ9H3S5 423 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.64
PTCH1-209ENST00000437951 MBP02144 154 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SPATA31C1P0DKV0 1188 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 UNGP13051 313 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 CASP6P55212 293 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 MAP4K2Q12851 820 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 USP51Q70EK9 711 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SHFQ7M4L6 423 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SSX7Q7RTT5 188 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 PTPN18Q99952 460 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 OSBPL2Q9H1P3 480 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 CTPS2Q9NRF8 586 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 FOXO6A8MYZ6 492 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TAS2R46P59540 309 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 POU6F2P78424 691 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 NOGQ13253 232 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 LRP8Q14114 963 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 RBM23Q86U06 439 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 OR2T11Q8NH01 316 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 RBMXL1Q96E39 390 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 CNOT2Q9NZN8 540 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 KLRF1Q9NZS2 232 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 EVLQ9UI08 416 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SCAMP1O15126 338 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 IL1AP01583 271 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 CKMT1AP12532 417 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ATP1B2P14415 290 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 AGXTP21549 392 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TAS1R3Q7RTX0 852 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 CD163Q86VB7 1156 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ZFAND4Q86XD8 727 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TEX26Q8N6G2 289 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 PPTC7Q8NI37 304 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF461Q8TAF7 563 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TMEM74Q96NL1 305 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 FAM83CQ9BQN1 747 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TRMT61BQ9BVS5 477 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 QRSL1Q9H0R6 528 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF442Q9H7R0 627 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 MT-CYBP00156 380 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 PRKACGP22612 351 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 PLA2G7Q13093 441 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 TATDN3Q17R31 274 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 PLEKHS1Q5SXH7 462 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SFRP4Q6FHJ7 346 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 GALNT10Q86SR1 603 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ADAMTS14Q8WXS8 1223 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 B3GNT2Q9NY97 397 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SDC3O75056 442 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 SRPXP78539 464 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 B3GLCTQ6Y288 498 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 C2orf73Q8N5S3 287 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 RBPMSQ93062 196 aaKnown RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 NMNAT2Q9BZQ4 307 aa11.02□□□□□ -0.65
PTCH1-209ENST00000437951 ZBTB20Q9HC78 741 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 DNMT3AQ9Y6K1 912 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-209ENST00000437951 VWDEQ8N2E2 1590 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CLEC3AO75596 197 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CXCL14O95715 111 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms