RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 GMPRP36959 345 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 GYS2P54840 703 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 GNGT1P63211 74 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 STX3Q13277 289 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 RCAN2Q14206 197 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC01088-201ENST00000437737 TOMM20Q15388 145 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 CFAP157Q5JU67 520 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 LYPD8Q6UX82 237 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 C10orf107Q8IVU9 208 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 C9orf40Q8IXQ3 194 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 DND1Q8IYX4 353 aaKnown RBP12.87□□□□□ -0.35
LINC01088-201ENST00000437737 SLC15A4Q8N697 577 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 EGFL8Q99944 293 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 UBTD1Q9HAC8 227 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 C6orf203Q9P0P8 240 aaPredicted RBP12.87□□□□□ -0.35
LINC01088-201ENST00000437737 NDRG3Q9UGV2 375 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 SLC6A5Q9Y345 797 aa12.87□□□□□ -0.35
LINC01088-201ENST00000437737 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
LINC01088-201ENST00000437737 DSCAMO60469 2012 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 ANKDD1BA6NHY2 528 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 A8MT66 165 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 TMEM114B3SHH9 223 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 DYRK3O43781 588 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 CRLF1O75462 422 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 GNAZP19086 355 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 FPR1P21462 350 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 GSTM2P28161 218 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 SERPINB3P29508 390 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 LSP1P33241 339 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 KCNC1P48547 511 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 CHI3L2Q15782 390 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 PPP1R3AQ16821 1122 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 PFKFB4Q16877 469 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 SBSNQ6UWP8 590 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 C9orf106Q8NAJ2 232 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 PDPRQ8NCN5 879 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 DIO2Q92813 273 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
LINC01088-201ENST00000437737 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 GAL3ST4Q96RP7 486 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 SECISBP2Q96T21 854 aaKnown RBP12.86□□□□□ -0.35
LINC01088-201ENST00000437737 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 NSRP1Q9H0G5 558 aaKnown RBP12.86□□□□□ -0.35
LINC01088-201ENST00000437737 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
LINC01088-201ENST00000437737 THAP1Q9NVV9 213 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 CNOT11Q9UKZ1 510 aaKnown RBP12.86□□□□□ -0.35
LINC01088-201ENST00000437737 SPACA6W5XKT8 324 aa12.86□□□□□ -0.35
LINC01088-201ENST00000437737 GMNCA6NCL1 334 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 UBXN8O00124 270 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 NPHS1O60500 1241 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 CLEC3AO75596 197 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 WDR47O94967 919 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 CNOT4O95628 575 aaKnown RBP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 VIMP08670 466 aaKnown RBP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 FBXO45P0C2W1 286 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 MTHFD2P13995 350 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 BGNP21810 368 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 CPOXP36551 454 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PIK3CGP48736 1102 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 MASP1P48740 699 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 HERVK_113P63132 956 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 TGM3Q08188 693 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 FOXF2Q12947 444 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 SETDB1Q15047 1291 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 ACKR1Q16570 336 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 TBCELQ5QJ74 424 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 VASNQ6EMK4 673 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 ABHD17CQ6PCB6 329 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PTGR2Q8N8N7 351 aaPredicted RBP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 EXT2Q93063 718 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PHF21BQ96EK2 531 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 CHMP6Q96FZ7 201 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 ART5Q96L15 291 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 MECRQ9BV79 373 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 SFXN3Q9BWM7 321 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 ERVK-6Q9BXR3 956 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 UGT2B28Q9BY64 529 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 CALHM2Q9HA72 323 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PSD3Q9NYI0 1048 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
LINC01088-201ENST00000437737 IKZF3Q9UKT9 509 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 STK38LQ9Y2H1 464 aa12.85□□□□□ -0.35
LINC01088-201ENST00000437737 ZANQ9Y493 2812 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 TRIM3O75382 744 aaPredicted RBP12.84□□□□□ -0.35
LINC01088-201ENST00000437737 HPNP05981 417 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 GGT5P36269 586 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 STT3AP46977 705 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 CDK9P50750 372 aaKnown RBP12.84□□□□□ -0.35
LINC01088-201ENST00000437737 NAGLUP54802 743 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 GALNT1Q10472 559 aaPredicted RBP12.84□□□□□ -0.35
LINC01088-201ENST00000437737 ADPRMQ3LIE5 342 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 DCST1Q5T197 706 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms