RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CAB39LQ9H9S4 337 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NTMQ9P121 344 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CADP27708 2225 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZFYVE26Q68DK2 2539 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC5A10A0PJK1 596 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NEDD8-MDP1E9PL57 170 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LEFTY2O00292 366 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SEC24DO94855 1032 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 KAT7O95251 611 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 VIPP01282 170 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CPMP14384 443 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DCTP40126 519 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OPRD1P41143 372 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ST3GAL4Q11206 333 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SURF2Q15527 256 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GJC2Q5T442 439 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RSBN1Q5VWQ0 802 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MED25Q71SY5 747 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MFSD6LQ8IWD5 586 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TAB3Q8N5C8 712 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR10A6Q8NH74 314 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CHAC2Q8WUX2 184 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SEC61A2Q9H9S3 476 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 EXOSC3Q9NQT5 275 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZDHHC2Q9UIJ5 367 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 FBXO10Q9UK96 956 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR10H1Q9Y4A9 318 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ATG2BQ96BY7 2078 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HEATR1Q9H583 2144 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 H7C1Q1 480 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SGK494L7N484 410 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PLOD2O00469 737 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR4F21O95013 312 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 YES1P07947 543 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GADD45AP24522 165 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RGS6P49758 472 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HNRNPKP61978 463 aaKnown RBP eCLIP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RPS24P62847 133 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC35A2P78381 396 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PON2Q15165 354 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RGNQ15493 299 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LTB4RQ15722 352 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PGS1Q32NB8 556 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF691Q5VV52 312 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 KCTD8Q6ZWB6 473 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PLXDC1Q8IUK5 500 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SIMC1Q8NDZ2 872 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR7D4Q8NG98 312 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HGDQ93099 445 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GAS2L1Q99501 681 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MECRQ9BV79 373 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLAMF7Q9NQ25 335 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 KCNIP2Q9NS61 270 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TRMT13Q9NUP7 481 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ATP6AP2A0A1C7CYW4 349 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF254O75437 659 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HRGP04196 525 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ACP2P11117 423 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 NDUFV2P19404 249 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CAPN3P20807 821 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ITPKAP23677 461 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MZF1P28698 734 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TRIM23P36406 574 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GPR3P46089 330 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 RBM39Q14498 530 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SNAPC1Q16533 368 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PPM1JQ5JR12 505 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 C8orf82Q6P1X6 216 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GK5Q6ZS86 529 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 LNX2Q8N448 690 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OR56B4Q8NH76 319 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ZFP90Q8TF47 636 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CASD1Q96PB1 797 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 WDR83Q9BRX9 315 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ACPTQ9BZG2 426 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 PCDH12Q9NPG4 1184 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 B3GAT2Q9NPZ5 323 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TIGARQ9NQ88 270 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SLC35C2Q9NQQ7 365 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ENAMQ9NRM1 1142 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GCN1Q92616 2671 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 DHRS7CA6NNS2 312 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 GADD45GO95257 159 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CYP17A1P05093 508 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 SRCP12931 536 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HOXA6P31267 233 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HNF1BP35680 557 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 MTNR1BP49286 362 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 WDR5P61964 334 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 HTRA4P83105 476 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TLE2Q04725 743 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TPBGQ13641 420 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 ENTPD8Q5MY95 495 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 OTUD3Q5T2D3 398 aaPredicted RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 WBP2NLQ6ICG8 309 aa3.57□□□□□ -1.84
SHPRH-205ENST00000433355 CXorf57Q6NSI4 855 aaKnown RBP3.57□□□□□ -1.84
SHPRH-205ENST00000433355 TRNP1Q6NT89 227 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms