RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 A6NNC1 897 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 A8MT66 165 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 AHRRA9YTQ3 701 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 SYT5O00445 386 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 ICOSLGO75144 302 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 PPM1BO75688 479 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 SEMA3DO95025 777 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 SNX4O95219 450 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 ESRRBO95718 433 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 CBX7O95931 251 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 IL2RAP01589 272 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 RBP1P09455 135 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 GALNSP34059 522 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 ASCL1P50553 236 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 PLCXD2Q0VAA5 305 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 TBL3Q12788 808 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 TBCELQ5QJ74 424 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 TIGD3Q6B0B8 471 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 ZNF572Q7Z3I7 529 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 CCDC116Q8IYX3 515 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 CDYL2Q8N8U2 506 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 RNASE6Q93091 150 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 HGDQ93099 445 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 CNRIP1Q96F85 164 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 RMND5BQ96G75 393 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 MTORP42345 2549 aa12.99□□□□□ -0.33
SMARCE1-205ENST00000431889 ANKRD33BA6NCL7 494 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 STX16-NPEPL1H3BU86 382 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 STX16O14662 325 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 MAGEA12P43365 314 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 HTR6P50406 440 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 ARFIP1P53367 373 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 CORO7P57737 925 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 BTKQ06187 659 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 PAGE2Q7Z2X7 111 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 LACC1Q8IV20 430 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 GCNT2Q8N0V5 402 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 C7orf57Q8NEG2 295 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 OR14L1PQ8NHC6 308 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMBIM1Q969X1 311 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TUBA1CQ9BQE3 449 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 OSBPL11Q9BXB4 747 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 EBPLQ9BY08 206 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 PRDM14Q9GZV8 571 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 AHSPQ9NZD4 102 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 IKBKGQ9Y6K9 419 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 B4DXG7 233 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 FAM47E-STBD1D6RA91 191 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 RPS17P08708 135 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 CTAGE8P0CG41 777 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 KLK2P20151 261 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMED10P49755 219 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 DGKQP52824 942 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 HMGCS1Q01581 520 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 NSUN5P2Q63ZY6 315 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 Q71RC1 249 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 CCDC91Q7Z6B0 441 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 CTAGE4Q8IX94 777 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 WDSUB1Q8N9V3 476 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 OR7G1Q8NGA0 311 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 OR9A2Q8NGT5 310 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 CDC26Q8NHZ8 85 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 LCORQ96JN0 433 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 KCNA7Q96RP8 456 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMUB1Q9BVT8 246 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 TMEM216Q9P0N5 145 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 UTS2RQ9UKP6 389 aa12.98□□□□□ -0.33
SMARCE1-205ENST00000431889 C1orf226A1L170 272 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 TUBAL3A6NHL2 446 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 REM1O75628 298 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 SUPT7LO94864 414 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 IL3P08700 152 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 TMIGD3P0DMS9 266 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 CSNK2A2P19784 350 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 ECHS1P30084 290 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 TIMP3P35625 211 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 HSD17B3P37058 310 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 EMDP50402 254 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 RAE1P78406 368 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 CKAP4Q07065 602 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 MAP4K2Q12851 820 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 FOXD4Q12950 439 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 UNC50Q53HI1 259 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 MED12LQ86YW9 2145 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 TRIM42Q8IWZ5 723 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 PM20D2Q8IYS1 436 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 OR4N2Q8NGD1 307 aa12.97□□□□□ -0.33
SMARCE1-205ENST00000431889 INTS12Q96CB8 462 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms