RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 MBTPS1Q14703 1052 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 TATDN3Q17R31 274 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 ADGRD2Q7Z7M1 963 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 CCDC28AQ8IWP9 274 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 OR4N5Q8IXE1 308 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 OR2A12Q8NGT7 310 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 TRMT2BQ96GJ1 504 aaKnown RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 TREX2Q9BQ50 279 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PDCD10Q9BUL8 212 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 GPN1Q9HCN4 374 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 OSGIN1Q9UJX0 560 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 SNX11Q9Y5W9 270 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 ZSCAN5BA6NJL1 495 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 CHURC1-FNTBB4DL54 471 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 KMOO15229 486 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PRODHO43272 600 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 FZD6O60353 706 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PRSS23O95084 383 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 ETHE1O95571 254 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 HMGN2P05204 90 aaKnown RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 ATF4P18848 351 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 EDNRAP25101 427 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 APEX1P27695 318 aaKnown RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PSMB5P28074 263 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 ACADLP28330 430 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 SLC6A12P48065 614 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 MLLT11Q13015 90 aaPredicted RBP11.97□□□□□ -0.49
CPNE4-201ENST00000429747 NTRK2Q16620 822 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 CST9Q5W186 159 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 CPOQ8IVL8 374 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 C10orf111Q8N326 155 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 OR52E4Q8NGH9 312 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 TANKQ92844 425 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 NEDD4LQ96PU5 975 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 SGIP1Q9BQI5 828 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 SAP130Q9H0E3 1048 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 MED31Q9Y3C7 131 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 PCDHGA3Q9Y5H0 932 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 FKBP7Q9Y680 259 aa11.97□□□□□ -0.49
CPNE4-201ENST00000429747 IQCMA0A1B0GVH7 501 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 FAM183AA6NL82 134 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 ALAS2P22557 587 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 TGM1P22735 817 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 AP3S2P59780 193 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 CAMK1Q14012 370 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 ZNF385BQ569K4 471 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 MLIPQ5VWP3 458 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 WDR53Q7Z5U6 358 aaPredicted RBP11.96□□□□□ -0.49
CPNE4-201ENST00000429747 SLC9B2Q86UD5 537 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 RBM45Q8IUH3 476 aaKnown RBP11.96□□□□□ -0.49
CPNE4-201ENST00000429747 OR4F15Q8NGB8 312 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 SNAPC3Q92966 411 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 LRIG1Q96JA1 1093 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 ERMAPQ96PL5 475 aaPredicted RBP11.96□□□□□ -0.49
CPNE4-201ENST00000429747 EGLN3Q9H6Z9 239 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 INIPQ9NRY2 104 aa11.96□□□□□ -0.49
CPNE4-201ENST00000429747 GPX5O75715 221 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 WISP3O95389 354 aaPredicted RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 SCG5P05408 212 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PEPDP12955 493 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 NDUFV2P19404 249 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 ITPKBP27987 946 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 MNDAP41218 407 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 CSRP3P50461 194 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 TAP2Q03519 686 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 FAM26DQ5JW98 314 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 HLA-DQA1Q5Y7H0 255 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 OR4C11Q6IEV9 310 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 B3GLCTQ6Y288 498 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 GAREM2Q75VX8 874 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 ERN2Q76MJ5 926 aaKnown RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PDZD3Q86UT5 571 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 SAMD14Q8IZD0 417 aaPredicted RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 MMP21Q8N119 569 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 MFSD4AQ8N468 514 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 OR6C4Q8NGE1 309 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 FANK1Q8TC84 345 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 CHTF18Q8WVB6 975 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 DPF3Q92784 378 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PPIL3Q9H2H8 161 aaKnown RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 TCF7L1Q9HCS4 588 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 ACER3Q9NUN7 267 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 CUEDC1Q9NWM3 386 aaPredicted RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 AP1M2Q9Y6Q5 423 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 SLC19A2O60779 497 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 COQ9O75208 318 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 NCR1O76036 304 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 SPNP16150 400 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 HK1P19367 917 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PCMT1P22061 227 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PRLHRP49683 370 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 GMFBP60983 142 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 ZNF267Q14586 743 aaPredicted RBP11.96□□□□□ -0.5
CPNE4-201ENST00000429747 KIAA0040Q15053 153 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 FAHD1Q6P587 224 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PAQR6Q6TCH4 344 aa11.96□□□□□ -0.5
CPNE4-201ENST00000429747 PARS2Q7L3T8 475 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms