RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TMEM216Q9P0N5 145 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 MAPRE3Q9UPY8 281 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 CFL2Q9Y281 166 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF780BQ9Y6R6 833 aa15.61■□□□□ 0.09
TRIM39-209ENST00000428728 SPG11Q96JI7 2443 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 C2orf72A6NCS6 295 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 AHRRA9YTQ3 701 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 DVL2O14641 736 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 EPPINO95925 133 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 KRT6AP02538 564 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 KRT6BP04259 564 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 CHN1P15882 459 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 GCAP28676 217 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HMOX2P30519 316 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 SOX18P35713 384 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 KRT6CP48668 564 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HTR6P50406 440 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 ASCL1P50553 236 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 ART1P52961 327 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 RASA2Q15283 850 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 TRMT12Q53H54 448 aaKnown RBP15.6■□□□□ 0.09
TRIM39-209ENST00000428728 UNC50Q53HI1 259 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF678Q5SXM1 525 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 TIGD3Q6B0B8 471 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 SPNS3Q6ZMD2 512 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 GPRIN3Q6ZVF9 776 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 YRDCQ86U90 279 aaKnown RBP15.6■□□□□ 0.09
TRIM39-209ENST00000428728 PM20D2Q8IYS1 436 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 OR1J4Q8NGS1 313 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HGDQ93099 445 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HSPBAP1Q96EW2 488 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 LCORQ96JN0 433 aaPredicted RBP15.6■□□□□ 0.09
TRIM39-209ENST00000428728 TRIB1Q96RU8 372 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 NODALQ96S42 347 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 UGT2B28Q9BY64 529 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 PRDM14Q9GZV8 571 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 ANKRA2Q9H9E1 313 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 DNAJB12Q9NXW2 375 aaKnown RBP15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HEY2Q9UBP5 337 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 VPS29Q9UBQ0 182 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF639Q9UID6 485 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 UTS2RQ9UKP6 389 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 PSME2Q9UL46 239 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 NFU1Q9UMS0 254 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 AKAP6Q13023 2319 aa15.6■□□□□ 0.09
TRIM39-209ENST00000428728 HIVEP1P15822 2718 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 GOLGA8RI6L899 631 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 PCDH7O60245 1069 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 UGT2B11O75310 529 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 IL3P08700 152 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 BMP7P18075 431 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 PTPN6P29350 595 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 KIR2DL3P43628 341 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 RIPPLY3P57055 190 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 CSTF3Q12996 717 aaKnown RBP15.59■□□□□ 0.09
TRIM39-209ENST00000428728 GLE1Q53GS7 698 aaKnown RBP15.59■□□□□ 0.09
TRIM39-209ENST00000428728 LGSNQ5TDP6 509 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 VASNQ6EMK4 673 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 FAM83FQ8NEG4 500 aaPredicted RBP15.59■□□□□ 0.09
TRIM39-209ENST00000428728 ZNF382Q96SR6 550 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 SH3GL2Q99962 352 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 GPATCH1Q9BRR8 931 aaKnown RBP15.59■□□□□ 0.09
TRIM39-209ENST00000428728 SERHLQ9NQF3 203 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 C2CD3Q4AC94 2353 aa15.59■□□□□ 0.09
TRIM39-209ENST00000428728 GNG14A0A1W2PPG7 69 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 PRAMEF25A6NGN4 478 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 SNPHO15079 494 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ACOX3O15254 700 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 DLX3O60479 287 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ICOSLGO75144 302 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 CDH16O75309 829 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 NME6O75414 186 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 IL2RAP01589 272 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ABHD2P08910 425 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 HSD3B1P14060 373 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 HSD3B2P26439 372 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 DNAJA1P31689 397 aaKnown RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 CEACAM8P31997 349 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 PTGDSP41222 190 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ZNF136P52737 540 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 NAGLUP54802 743 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 TRA2BP62995 288 aaKnown RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 NUP54Q7Z3B4 507 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 RDH11Q8TC12 318 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 KAT2AQ92830 837 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ABTB1Q969K4 478 aaPredicted RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 EXOSC8Q96B26 276 aaKnown RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 CTHRC1Q96CG8 243 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 MTBPQ96DY7 904 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 LRRC46Q96FV0 321 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 WDYHV1Q96HA8 205 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ZNF681Q96N22 645 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 EBPLQ9BY08 206 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 POLDIP3Q9BY77 421 aaKnown RBP15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ACPTQ9BZG2 426 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 CRIM1Q9NZV1 1036 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 PRODH2Q9UF12 536 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 MCM8Q9UJA3 840 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 DLGAP4Q9Y2H0 992 aa15.58■□□□□ 0.08
TRIM39-209ENST00000428728 ANKHD1Q8IWZ3 2542 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms