RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 FXNQ16595 210 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 LRRC23Q53EV4 343 aaPredicted RBP15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 MFSD12Q6NUT3 480 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 CDC73Q6P1J9 531 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 ZFP1Q6P2D0 407 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 C16orf62Q7Z3J2 963 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 PTOV1Q86YD1 416 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 CACTIN-AS1Q8N1I8 211 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 CDRT4Q8N9R6 151 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 OR52R1Q8NGF1 315 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 OR5D16Q8NGK9 328 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 OR14A16Q8NHC5 309 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 NFKBIDQ8NI38 313 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 MIPOL1Q8TD10 442 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 SLC9A6Q92581 669 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 RAB8BQ92930 207 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 MAL2Q969L2 176 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 OR7D2Q96RA2 312 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 A4GALTQ9NPC4 353 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 EXD2Q9NVH0 621 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 PADI1Q9ULC6 663 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 PCDHGA8Q9Y5G5 932 aa15.99■□□□□ 0.15
CCDC28B-202ENST00000421922 VSTM2BA6NLU5 285 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 HMGN4O00479 90 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 ASNA1O43681 348 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 BRINP1O60477 761 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 CREG1O75629 220 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 TNFSF15O95150 251 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 PSMG1O95456 288 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 BCHEP06276 602 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 ALOX5P09917 674 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 NR2F1P10589 423 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 RIPK1Q13546 671 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 NCF4Q15080 339 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 FHL5Q5TD97 284 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 AAGABQ6PD74 315 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 ZCCHC12Q6PEW1 402 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 LAPTM4BQ86VI4 370 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 LGI4Q8N135 537 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 OR7G1Q8NGA0 311 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 CTHRC1Q96CG8 243 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 C16orf58Q96GQ5 468 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 EFHD1Q9BUP0 239 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 GORASP2Q9H8Y8 452 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 CACYBPQ9HB71 228 aaKnown RBP15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 COPS7AQ9UBW8 275 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 PRODH2Q9UF12 536 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 RPS6KA6Q9UK32 745 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 CFL2Q9Y281 166 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 PCDHGB3Q9Y5G1 929 aa15.98■□□□□ 0.15
CCDC28B-202ENST00000421922 PMS2P1A4D2B8 440 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 H0Y3Z8 333 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 PDE9AO76083 593 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 ATP6V1G2O95670 118 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 RECKO95980 971 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 IFNA14P01570 189 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 C8BP07358 591 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 RBMS1P29558 406 aaKnown RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 RHDQ02161 417 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 MGAT2Q10469 447 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 ADRM1Q16186 407 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 RSPO4Q2I0M5 234 aaPredicted RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 GPAT3Q53EU6 434 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 REEP3Q6NUK4 255 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 MRPL14Q6P1L8 145 aaKnown RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 FAM199XQ6PEV8 388 aaPredicted RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 FAM198BQ6UWH4 519 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 DGAT2L6Q6ZPD8 337 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 ESX1Q8N693 406 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 METTL25Q8N6Q8 603 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 GOLM1Q8NBJ4 401 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 PYDC1Q8WXC3 89 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 OTUB1Q96FW1 271 aaPredicted RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 OR8D2Q9GZM6 311 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 DCLRE1BQ9H816 532 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 CALML5Q9NZT1 146 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 CCDC88CQ9P219 2028 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 SAMD4AQ9UPU9 718 aaKnown RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 LIPT1Q9Y234 373 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 PTRH2Q9Y3E5 179 aaKnown RBP15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 ZNF451Q9Y4E5 1061 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 CLDN16Q9Y5I7 305 aa15.97■□□□□ 0.15
CCDC28B-202ENST00000421922 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 TEX51A0A1B0GUA7 166 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 DHRS12A0PJE2 317 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 FAM149AA5PLN7 773 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 C9orf172C9J069 976 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 KRT36O76013 467 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 SOX30O94993 753 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 DLGAP3O95886 979 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 CBX7O95931 251 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 SERPINA1P01009 418 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 GPIP06744 558 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 UMPSP11172 480 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 AQP1P29972 269 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 SSTR4P31391 388 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 FOLR3P41439 243 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 CRISP3P54108 245 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 GABREP78334 506 aa15.96■□□□□ 0.15
CCDC28B-202ENST00000421922 RCN1Q15293 331 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms