RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DTX4Q9Y2E6 619 aa14.56□□□□□ -0.08
BRAT1-202ENST00000421712 KLF13Q9Y2Y9 288 aaPredicted RBP14.56□□□□□ -0.08
BRAT1-202ENST00000421712 SNX8Q9Y5X2 465 aa14.56□□□□□ -0.08
BRAT1-202ENST00000421712 UPK1AO00322 258 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 ZNF195O14628 629 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 UBDO15205 165 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 POLR3GO15318 223 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 KALRNO60229 2985 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 ABCB1P08183 1280 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 VIMP08670 466 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 CDK9P50750 372 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 CLNS1AP54105 237 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 UFM1P61960 85 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 SRSF11Q05519 484 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 TMEM198Q66K66 360 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 MDGA2Q7Z553 956 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 RIMKLAQ8IXN7 391 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 PRR22Q8IZ63 422 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 GRHL3Q8TE85 626 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 OR5P2Q8WZ92 322 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 SCMH1Q96GD3 660 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 MAELQ96JY0 434 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 SGCZQ96LD1 299 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 NXF5Q9H1B4 397 aaKnown RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 FOLH1BQ9HBA9 442 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 EQTNQ9NQ60 294 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 ASF1BQ9NVP2 202 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 C19orf53Q9UNZ5 99 aaPredicted RBP14.55□□□□□ -0.08
BRAT1-202ENST00000421712 PCDHGB6Q9Y5F9 930 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 NPFFR2Q9Y5X5 522 aa14.55□□□□□ -0.08
BRAT1-202ENST00000421712 SMG1Q96Q15 3661 aaKnown RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 KLRC4-KLRK1H3BQV0 150 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 EDF1O60869 148 aaKnown RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 ERN1O75460 977 aaKnown RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 NADKO95544 446 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 C6orf47O95873 294 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 P04436 131 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 IDO1P14902 403 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 DRD5P21918 477 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 S100A3P33764 101 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 FRKP42685 505 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 KIR3DL1P43629 444 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 PPICP45877 212 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 TMED10P49755 219 aaKnown RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 IDH3AP50213 366 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 C21orf58P58505 322 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 PMP22Q01453 160 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 GUCY1A3Q02108 690 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 ZNHIT3Q15649 155 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 IGFBP7Q16270 282 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 INAQ16352 499 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 GSTA3Q16772 222 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 SPDYE7PQ495Y7 208 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 FHL5Q5TD97 284 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 SLC22A10Q63ZE4 541 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 OR4F3Q6IEY1 312 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 ZNF227Q86WZ6 799 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 SLC44A2Q8IWA5 706 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 OR2L13Q8N349 312 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 BCORP1Q8N888 145 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 ZNF441Q8N8Z8 693 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 PSD4Q8NDX1 1056 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 C17orf47Q8NEP4 570 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 VPS37AQ8NEZ2 397 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 NUP43Q8NFH3 380 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 SPACA9Q96E40 222 aaPredicted RBP14.54□□□□□ -0.08
BRAT1-202ENST00000421712 HSPBAP1Q96EW2 488 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 NPHS2Q9NP85 383 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 TCF7L2Q9NQB0 619 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 PCDHGB4Q9UN71 923 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 OR10H1Q9Y4A9 318 aa14.54□□□□□ -0.08
BRAT1-202ENST00000421712 FRG2CA6NGY1 282 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 E9PBE3 544 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 G3V3Y1 287 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 PYCARD-AS1I3L0S3 204 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 TP53I11O14683 189 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 EMC8O43402 210 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 PEX1O43933 1283 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 NME2P1O60361 137 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 CRYABP02511 175 aaKnown RBP14.53□□□□□ -0.08
BRAT1-202ENST00000421712 FBXO45P0C2W1 286 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 NME2P22392 152 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 ABCD3P28288 659 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 KRT20P35900 424 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 GPR85P60893 370 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 STX1BP61266 288 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 PRR5P85299 388 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 PLCXD2Q0VAA5 305 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 MLC1Q15049 377 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 ZNF791Q3KP31 576 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-202ENST00000421712 ANXA8L1Q5VT79 327 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 SULF2Q8IWU5 870 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 DND1Q8IYX4 353 aaKnown RBP14.53□□□□□ -0.08
BRAT1-202ENST00000421712 GOLM1Q8NBJ4 401 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 RILPQ96NA2 401 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 EBF4Q9BQW3 602 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 SACM1LQ9NTJ5 587 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 RYDENQ9NUL5 291 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms