RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TP53BP2Q13625 1128 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 NSDHLQ15738 373 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 TRMT12Q53H54 448 aaKnown RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CRB2Q5IJ48 1285 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 FAM111BQ6SJ93 734 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 IFNEQ86WN2 208 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CLEC4FQ8N1N0 589 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 HORMAD2Q8N7B1 307 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZNF615Q8N8J6 731 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ENDOVQ8N8Q3 282 aaKnown RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 MORN4Q8NDC4 146 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 HIPK4Q8NE63 616 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 BHLHE22Q8NFJ8 381 aaPredicted RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR14A16Q8NHC5 309 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 DAZLQ92904 295 aaKnown RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 LRGUKQ96M69 825 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 LMF2Q9BU23 707 aaKnown RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 PIGUQ9H490 435 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 SERHL2Q9H4I8 314 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 DCAF13Q9NV06 445 aaKnown RBP13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ARMC1Q9NVT9 282 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 PACSIN3Q9UKS6 424 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 PADI1Q9ULC6 663 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CFL2Q9Y281 166 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 PTPRBP23467 1997 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 FREM2Q5SZK8 3169 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 SCN3AQ9NY46 2000 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR6C76A6NM76 312 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 A8MUI8 341 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 IDSB3KWA1 339 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 C9J4A7 227 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CDC123O75794 336 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 KLF7O75840 302 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 DXOO77932 396 aaKnown RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 IGHEP01854 428 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CT62P0C5K7 136 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 KDELR2P33947 212 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 MSX2P35548 267 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 EMDP50402 254 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 ID2Q02363 134 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 NCF4Q15080 339 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 MINDY4Q4G0A6 757 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 REEP3Q6NUK4 255 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 C6orf15Q6UXA7 325 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 LAPTM4BQ86VI4 370 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 C17orf47Q8NEP4 570 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 ADCY4Q8NFM4 1077 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR2Y1Q8NGV0 311 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 PNPT1Q8TCS8 783 aaKnown RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 SLC38A5Q8WUX1 472 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 OIT3Q8WWZ8 545 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 KAT2AQ92830 837 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 PMEPA1Q969W9 287 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 NSMCE2Q96MF7 247 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 TRNT1Q96Q11 434 aaKnown RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 YIPF2Q9BWQ6 316 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 BTBD2Q9BX70 525 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 RBCK1Q9BYM8 510 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR51I1Q9H343 314 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 POLE3Q9NRF9 147 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CCM2LQ9NUG4 571 aaPredicted RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CALML5Q9NZT1 146 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 GMPR2Q9P2T1 348 aaKnown RBP13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 PRODH2Q9UF12 536 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 EGFL7Q9UHF1 273 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 CROCCQ5TZA2 2017 aa13.29□□□□□ -0.28
SHMT1P1-201ENST00000419974 KNTC1P50748 2209 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZZEF1O43149 2961 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 NUP210LQ5VU65 1888 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 TMEM247A6NEH6 219 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 C21orf140B9A014 251 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 GSTA4O15217 222 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 CNOT3O75175 753 aaKnown RBP13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 ALOX12BO75342 701 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 NKX2-2O95096 273 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 IFNA14P01570 189 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 CLPSP04118 112 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 CCNYL3P0C7X3 344 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 SPTBP11277 2137 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 ETS2P15036 469 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 ATP6V1B2P21281 511 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 SLC7A1P30825 629 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 CLCN2P51788 898 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 GPR143P51810 404 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 MRPS35P82673 323 aaKnown RBP13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 TARDBPQ13148 414 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 SCARB2Q14108 478 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 MAPK11Q15759 364 aa13.28□□□□□ -0.28
SHMT1P1-201ENST00000419974 LCN10Q6JVE6 187 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms