RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ITPAQ9BY32 194 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 ANGPTL4Q9BY76 406 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 LDAHQ9H6V9 325 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 ACKR4Q9NPB9 350 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 COQ3Q9NZJ6 369 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 CCL27Q9Y4X3 112 aa15.12■□□□□ 0.01
LINC00404-201ENST00000418660 SLC28A1O00337 649 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 PPM1BO75688 479 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 ABCB1P08183 1280 aaPredicted RBP15.11■□□□□ 0.01
LINC00404-201ENST00000418660 PRPH2P23942 346 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 CASP3P42574 277 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 CDSNQ15517 529 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 CLEC6AQ6EIG7 209 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 FAM71E1Q6IPT2 247 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 NOXRED1Q6NXP6 359 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 RNF165Q6ZSG1 346 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 NUP54Q7Z3B4 507 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 HOMEZQ8IX15 550 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 MARVELD2Q8N4S9 558 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 OR5M9Q8NGP3 310 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 OR9A2Q8NGT5 310 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 SARAFQ96BY9 339 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 SDCCAG3Q96C92 435 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 RILPQ96NA2 401 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 FAM111AQ96PZ2 611 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 RUBCNLQ9H714 662 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 MYNNQ9NPC7 610 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 PNPLA3Q9NST1 481 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 B4GALT7Q9UBV7 327 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 POLR3HQ9Y535 204 aaPredicted RBP15.11■□□□□ 0.01
LINC00404-201ENST00000418660 NCOA6Q14686 2063 aaPredicted RBP15.11■□□□□ 0.01
LINC00404-201ENST00000418660 GTF3C1Q12789 2109 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 EML6Q6ZMW3 1958 aa15.11■□□□□ 0.01
LINC00404-201ENST00000418660 MYO1GB0I1T2 1018 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 NPIPB8E9PQR5 432 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 AZIN1O14977 448 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 TO15178 435 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 SEC22BO75396 215 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 ALDH3A1P30838 453 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 PLCXD2Q0VAA5 305 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 KIAA0040Q15053 153 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 NNATQ16517 81 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 BICRALQ6AI39 1079 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 TMEM81Q6P7N7 255 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 PACS2Q86VP3 889 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 TICAM1Q8IUC6 712 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 FAM9CQ8IZT9 166 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 CDC26Q8NHZ8 85 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 KAT2AQ92830 837 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 NTNG2Q96CW9 530 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 OMA1Q96E52 524 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 BBS4Q96RK4 519 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 TMEM109Q9BVC6 243 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 EXO5Q9H790 373 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 ANKRA2Q9H9E1 313 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 MIEF1Q9NQG6 463 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 TAS2R7Q9NYW3 318 aa15.1■□□□□ 0.01
LINC00404-201ENST00000418660 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC00404-201ENST00000418660 GPR55Q9Y2T6 319 aaPredicted RBP15.1■□□□□ 0.01
LINC00404-201ENST00000418660 V9GYY5 206 aaPredicted RBP15.1■□□□□ 0.01
LINC00404-201ENST00000418660 FRG2CA6NGY1 282 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 FIGNL2A6NMB9 653 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 RGS14O43566 566 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 NPHS1O60500 1241 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 PLOD3O60568 738 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 SPAG7O75391 227 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 CHEK2O96017 543 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 FGF4P08620 206 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ACVR2AP27037 513 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 GDF1P27539 372 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 MASP1P48740 699 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 PRSS53Q2L4Q9 553 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ERCC6LQ2NKX8 1250 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 WLSQ5T9L3 541 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ZNF585AQ6P3V2 769 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ACAD11Q709F0 780 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 IKBIPQ70UQ0 350 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 RPRMLQ8N4K4 120 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 MREGQ8N565 214 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 CA5BP1Q8WTZ4 195 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ASB5Q8WWX0 329 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 RND1Q92730 232 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 HGDQ93099 445 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 TMEM41AQ96HV5 264 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 BTBD9Q96Q07 612 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 STMN4Q9H169 189 aaPredicted RBP15.09■□□□□ 0.01
LINC00404-201ENST00000418660 LRTM1Q9HBL6 345 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 C1orf109Q9NX04 203 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 SLC17A7Q9P2U7 560 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 SPRR3Q9UBC9 169 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 TNFRSF10DQ9UBN6 386 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 ACAD8Q9UKU7 415 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 EXO1Q9UQ84 846 aaKnown RBP15.09■□□□□ 0.01
LINC00404-201ENST00000418660 PTGDR2Q9Y5Y4 395 aa15.09■□□□□ 0.01
LINC00404-201ENST00000418660 NBPF19A0A087WUL8 3843 aa15.08■□□□□ 0
LINC00404-201ENST00000418660 WDR1O75083 606 aa15.08■□□□□ 0
LINC00404-201ENST00000418660 SLITRK5O94991 958 aa15.08■□□□□ 0
LINC00404-201ENST00000418660 CT45A8P0DMV1 189 aa15.08■□□□□ 0
LINC00404-201ENST00000418660 CT45A9P0DMV2 189 aa15.08■□□□□ 0
LINC00404-201ENST00000418660 ENDOUP21128 410 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms