RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 NCOA6Q14686 2063 aaPredicted RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 TRGV5A0A0B4J1U4 118 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 AQP7O14520 342 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ADAM10O14672 748 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ACOX3O15254 700 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 RGS14O43566 566 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 SUSD5O60279 629 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 HCN1O60741 890 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 SPAG7O75391 227 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 SEC22BO75396 215 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 SNX4O95219 450 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 LRATO95237 230 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 MASP1P48740 699 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 PLCXD2Q0VAA5 305 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 NNATQ16517 81 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ZNF630Q2M218 657 aaPredicted RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 GXYLT1Q4G148 440 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ZNF628Q5EBL2 1059 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 CLEC6AQ6EIG7 209 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 NCCRP1Q6ZVX7 275 aaPredicted RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 CROCCP2Q86T23 111 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 PACS2Q86VP3 889 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 FAM9CQ8IZT9 166 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 OR9A2Q8NGT5 310 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 KAT2AQ92830 837 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ZNF597Q96LX8 424 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ZNF703Q9H7S9 590 aaPredicted RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
NUP50-204ENST00000417702 MYNNQ9NPC7 610 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 ACAD8Q9UKU7 415 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 FIS1Q9Y3D6 152 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 LIPGQ9Y5X9 500 aa14.07□□□□□ -0.16
NUP50-204ENST00000417702 LRRC3CA6NJW4 275 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 PPM1BO75688 479 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 CLDN14O95500 239 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 ABCB1P08183 1280 aaPredicted RBP14.06□□□□□ -0.16
NUP50-204ENST00000417702 CELA3AP09093 270 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 NEFHP12036 1026 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 DRD5P21918 477 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 ALDH3A1P30838 453 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 PPICP45877 212 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 EMDP50402 254 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 DUSP8Q13202 625 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 CEBPEQ15744 281 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 FAM71E1Q6IPT2 247 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 NOXRED1Q6NXP6 359 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 IKBIPQ70UQ0 350 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 NUP54Q7Z3B4 507 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 TICAM1Q8IUC6 712 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 LIX1Q8N485 282 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 TCP10LQ8TDR4 215 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 OMA1Q96E52 524 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 RILPQ96NA2 401 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 ANGPTL4Q9BY76 406 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 STMN4Q9H169 189 aaPredicted RBP14.06□□□□□ -0.16
NUP50-204ENST00000417702 METTL7AQ9H8H3 244 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 LRTM1Q9HBL6 345 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 C1orf109Q9NX04 203 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 SLC17A7Q9P2U7 560 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 HRH3Q9Y5N1 445 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 CACNA1CQ13936 2221 aa14.06□□□□□ -0.16
NUP50-204ENST00000417702 CENPEQ02224 2701 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 FRG2CA6NGY1 282 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 FIGNL2A6NMB9 653 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 RGS16O15492 202 aaPredicted RBP14.05□□□□□ -0.16
NUP50-204ENST00000417702 NPHS1O60500 1241 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 PLOD3O60568 738 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 TRIM3O75382 744 aaPredicted RBP14.05□□□□□ -0.16
NUP50-204ENST00000417702 RFPL3SP0C7P2 107 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 PRPH2P23942 346 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 GDF1P27539 372 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 GRNP28799 593 aaKnown RBP14.05□□□□□ -0.16
NUP50-204ENST00000417702 NTSP30990 170 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 SOX18P35713 384 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 CASP3P42574 277 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 NCBP2P52298 156 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP50-204ENST00000417702 ZNF844Q08AG5 666 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 BICRALQ6AI39 1079 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 ZNF585AQ6P3V2 769 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 SIMC1Q8NDZ2 872 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 CA5BP1Q8WTZ4 195 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 RND1Q92730 232 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 MARVELD3Q96A59 401 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 ACKR4Q9NPB9 350 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 TAS2R9Q9NYW1 312 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 TAS2R7Q9NYW3 318 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 GPR55Q9Y2T6 319 aaPredicted RBP14.05□□□□□ -0.16
NUP50-204ENST00000417702 CCL27Q9Y4X3 112 aa14.05□□□□□ -0.16
NUP50-204ENST00000417702 MYO1GB0I1T2 1018 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms