RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 CCNKO75909 580 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 HMGN2P05204 90 aaKnown RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 ACP5P13686 325 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 DRD3P35462 400 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 BCL6P41182 706 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 SMSP52788 366 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 DUSP2Q05923 314 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 SLC9A5Q14940 896 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 ZIC1Q15915 447 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 BAK1Q16611 211 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 ZNF750Q32MQ0 723 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 TMEM35AQ53FP2 167 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 FAM109BQ6ICB4 259 aaPredicted RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 TMEM64Q6YI46 380 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 MEX3DQ86XN8 651 aaKnown RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 FAM20CQ8IXL6 584 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 UBQLNLQ8IYU4 475 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 PSD4Q8NDX1 1056 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 QRSL1Q9H0R6 528 aaKnown RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 OSGEPL1Q9H4B0 414 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 MBNL1Q9NR56 388 aaKnown RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 NPAP1Q9NZP6 1156 aa12.53□□□□□ -0.4
CSTF2-203ENST00000415585 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
CSTF2-203ENST00000415585 A0A1W2PR48 441 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 PGRMC2O15173 223 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 CASC3O15234 703 aaKnown RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 LATO43561 262 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 PCDH8O95206 1070 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 IL1AP01583 271 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 MSL3P1P0C860 447 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 GSTM3P21266 225 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 AZGP1P25311 298 aaKnown RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 RAB28P51157 221 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 WNT4P56705 351 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 BNC1Q01954 994 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 HYAL2Q12891 473 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 SLAMF1Q13291 335 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 GNA13Q14344 377 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 GPAT3Q53EU6 434 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 KLHL22Q53GT1 634 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 C3orf38Q5JPI3 329 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 C22orf42Q6IC83 251 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 CCDC116Q8IYX3 515 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 TTLQ8NG68 377 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 OR8K5Q8NH50 307 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 SFXN5Q8TD22 340 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 TMEM203Q969S6 136 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 CNRIP1Q96F85 164 aaPredicted RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 CAMK1GQ96NX5 476 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 NEDD4LQ96PU5 975 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 PINK1Q9BXM7 581 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 IMP3Q9NV31 184 aaKnown RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 ATG4BQ9Y4P1 393 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 ASB4Q9Y574 426 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.4
CSTF2-203ENST00000415585 KCNE3Q9Y6H6 103 aa12.52□□□□□ -0.4
CSTF2-203ENST00000415585 A0A087WUU8 490 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 A0A0G2JPF8 293 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 HNRNPCL2B2RXH8 293 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 HNRNPCL3B7ZW38 293 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ERI3O43414 337 aaKnown RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 APOL3O95236 402 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 CHRM5P08912 532 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 CLEC2LP0C7M8 214 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 HNRNPCL4P0DMR1 293 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ACP2P11117 423 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 MYL12AP19105 171 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 HTR3AP46098 478 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 RFX2P48378 723 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ANXA11P50995 505 aaKnown RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 UBE3AQ05086 875 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 GPR50Q13585 617 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 RSBN1Q5VWQ0 802 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 NXNL2Q5VZ03 156 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ZNF544Q6NX49 715 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 BHLHB9Q6PI77 547 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 C12orf76Q8N812 135 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 TMEM163Q8TC26 289 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 MS4A6EQ96DS6 147 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 C16orf58Q96GQ5 468 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 ZNF486Q96H40 463 aaPredicted RBP12.52□□□□□ -0.41
CSTF2-203ENST00000415585 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 WDR26Q9H7D7 661 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 NEK6Q9HC98 313 aa12.52□□□□□ -0.41
CSTF2-203ENST00000415585 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms