RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PTGES3LE9PB15 166 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 KPNA4O00629 521 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 NUDT21O43809 227 aaKnown RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 HSF2Q03933 536 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 MERTKQ12866 999 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SWI5Q1ZZU3 235 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RTL4Q6ZR62 310 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM151BQ8IW70 566 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 METTL25Q8N6Q8 603 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 IFI44Q8TCB0 444 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZHX1-C8orf76Q96EF9 292 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 GPATCH1Q9BRR8 931 aaKnown RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 NPLQ9BXD5 320 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SERHL2Q9H4I8 314 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SERHLQ9NQF3 203 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ACSS1Q9NUB1 689 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PTTG2Q9NZH5 202 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 GPR45Q9Y5Y3 372 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SGK494L7N484 410 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ARNTLO00327 626 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CHST10O43529 356 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CREG1O75629 220 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 GPR75O95800 540 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 IFNGP01579 166 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ANXA8P13928 327 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RAB38P57729 211 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SMCO1Q147U7 214 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RABL3Q5HYI8 236 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RBM48Q5RL73 367 aaKnown RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF57Q68EA5 555 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 FAM156AQ8NDB6 213 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 NFKBIDQ8NI38 313 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CANT1Q8WVQ1 401 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RSC1A1Q92681 617 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RFKQ969G6 155 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 LIN37Q96GY3 246 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 FAM210AQ96ND0 272 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PLGRKTQ9HBL7 147 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RPRD1BQ9NQG5 326 aaKnown RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF223Q9UK11 482 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 MAU2Q9Y6X3 613 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 DPPA5A6NC42 116 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SOX1O00570 391 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 MYL12BO14950 172 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PROM1O43490 865 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PAX7P23759 505 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ACADLP28330 430 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 EPHA8P29322 1005 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RAB2AP61019 212 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RCAN2Q14206 197 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 VMACQ2NL98 169 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZIK1Q3SY52 487 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CDRT4Q8N9R6 151 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 OR52N2Q8NGI0 321 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PATE1Q8WXA2 126 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 C5orf34Q96MH7 638 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PCDHAC1Q9H158 963 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 LRRN3Q9H3W5 708 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PTGES2Q9H7Z7 377 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CCM2LQ9NUG4 571 aaPredicted RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 C14orf105Q9NVL8 296 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 KLRF1Q9NZS2 232 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 M0R036 132 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 BCKDKO14874 412 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 AVPR2P30518 371 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 RGS19P49795 217 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 KCNC4Q03721 635 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 SH2D5Q6ZV89 423 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 CARFQ8N187 725 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF540Q8NDQ6 660 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 BPIFB6Q8NFQ5 453 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ABHD11Q8NFV4 315 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 OR4K17Q8NGC6 315 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ZCCHC14Q8WYQ9 949 aaKnown RBP8.06□□□□□ -1.12
SYNE1-211ENST00000413186 FCGR1BQ92637 280 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 THRSPQ92748 146 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 HPS1Q92902 700 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 LOXL4Q96JB6 756 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 METTL7AQ9H8H3 244 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 ERVMER34-1Q9H9K5 563 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 DAPK2Q9UIK4 370 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 POLR1DQ9Y2S0 133 aa8.06□□□□□ -1.12
SYNE1-211ENST00000413186 PDCD11Q14690 1871 aaKnown RBP8.05□□□□□ -1.12
SYNE1-211ENST00000413186 A0A0X1KG70 313 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 GAPDHSO14556 408 aaPredicted RBP8.05□□□□□ -1.12
SYNE1-211ENST00000413186 GADD45GO95257 159 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 ACPPP15309 386 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 GPX3P22352 226 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 GABRA3P34903 492 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 IDH2P48735 452 aaKnown RBP8.05□□□□□ -1.12
SYNE1-211ENST00000413186 GDI2P50395 445 aaKnown RBP8.05□□□□□ -1.12
SYNE1-211ENST00000413186 DCDP81605 110 aaKnown RBP8.05□□□□□ -1.12
SYNE1-211ENST00000413186 PIGGQ5H8A4 983 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 C6orf52Q5T4I8 152 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 TMEM107Q6UX40 140 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 ZNF550Q7Z398 422 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 OR4N5Q8IXE1 308 aa8.05□□□□□ -1.12
SYNE1-211ENST00000413186 LAS2Q8IYD9 372 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms