RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KATNB1Q9BVA0 655 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 PRRG3Q9BZD7 231 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TMEM98Q9Y2Y6 226 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TRDV1A0A1B0GX56 115 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 LRIT2A6NDA9 550 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 PRRT4C9JH25 899 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 AP3D1O14617 1153 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 OR1F1O43749 312 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 HLA-DQB1P01920 261 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 GPC1P35052 558 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TAS2R38P59533 333 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 HTRA4P83105 476 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 ACSM1Q08AH1 577 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 TSPAN31Q12999 210 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 PDZK1Q5T2W1 519 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 RASSF6Q6ZTQ3 369 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 KIF18BQ86Y91 864 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 SIMC1Q8NDZ2 872 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 CXorf40AQ8TE69 158 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-208ENST00000410011 UFD1Q92890 307 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 GDF15Q99988 308 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 ANKRA2Q9H9E1 313 aa15.72■□□□□ 0.11
LIMS2-208ENST00000410011 PRRC2BQ5JSZ5 2229 aaKnown RBP15.71■□□□□ 0.11
LIMS2-208ENST00000410011 COL4A3Q01955 1670 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 CCDC182A6NF36 153 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 GPR89AB7ZAQ6 455 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 LCMT2O60294 686 aaKnown RBP15.71■□□□□ 0.11
LIMS2-208ENST00000410011 CHRM4P08173 479 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 CLTBP09497 229 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 GPR89BP0CG08 455 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 NTSP30990 170 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 SDC2P34741 201 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 MTNR1AP48039 350 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 PRDX1Q06830 199 aaKnown RBP15.71■□□□□ 0.11
LIMS2-208ENST00000410011 FUT5Q11128 374 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 CDK10Q15131 360 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 RAB42Q8N4Z0 105 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 TEX47Q8TBZ9 253 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 NXPE3Q969Y0 559 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 RNFT2Q96EX2 444 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 LRRC3BQ96PB8 259 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 SLC38A2Q96QD8 506 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 SAP130Q9H0E3 1048 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 TRPC4Q9UBN4 977 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 ACSL5Q9ULC5 683 aa15.71■□□□□ 0.11
LIMS2-208ENST00000410011 DENND4AQ7Z401 1863 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 A0A087WUU8 490 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 TGM4P49221 684 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 PPP3R1P63098 170 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 MXD1Q05195 221 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 ZIC1Q15915 447 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 FNDC3BQ53EP0 1204 aaKnown RBP15.71■□□□□ 0.1
LIMS2-208ENST00000410011 CACTIN-AS1Q8N1I8 211 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 AMER3Q8N944 861 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 POGLUT1Q8NBL1 392 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 ANKK1Q8NFD2 765 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 C1GALT1C1Q96EU7 318 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 ZC3HAV1LQ96H79 300 aaKnown RBP15.71■□□□□ 0.1
LIMS2-208ENST00000410011 KCNK12Q9HB15 430 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 PRKAG2Q9UGJ0 569 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 PRKAB1Q9Y478 270 aa15.71■□□□□ 0.1
LIMS2-208ENST00000410011 SCO2O43819 266 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 HCN1O60741 890 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 TMCC2O75069 709 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 GUCY1B2O75343 617 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 CSF2RAP15509 400 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 HLA-DMAP28067 261 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 MLLT3P42568 568 aaPredicted RBP15.7■□□□□ 0.1
LIMS2-208ENST00000410011 NCBP2P52298 156 aaKnown RBP eCLIP15.7■□□□□ 0.1
LIMS2-208ENST00000410011 RIN1Q13671 783 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 SLC9A5Q14940 896 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 PLPP4Q5VZY2 271 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 OR56A1Q8NGH5 318 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 LILRB4Q8NHJ6 448 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 SLC7A6Q92536 515 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 UCN3Q969E3 161 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 DEPDC7Q96QD5 511 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 ARHGDIGQ99819 225 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 PLA2G12AQ9BZM1 189 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 C11orf54Q9H0W9 315 aaPredicted RBP15.7■□□□□ 0.1
LIMS2-208ENST00000410011 MED17Q9NVC6 651 aa15.7■□□□□ 0.1
LIMS2-208ENST00000410011 B4DXG7 233 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 UBXN7O94888 489 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 CLEC2LP0C7M8 214 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 LIMS3P0CW19 117 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 LIMS4P0CW20 117 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 GALP22466 123 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 AZGP1P25311 298 aaKnown RBP15.69■□□□□ 0.1
LIMS2-208ENST00000410011 PSMB5P28074 263 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 SSR2P43308 183 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 GJA8P48165 433 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 RPS25P62851 125 aaKnown RBP15.69■□□□□ 0.1
LIMS2-208ENST00000410011 CDK3Q00526 305 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 DMPKQ09013 629 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 TRAM2Q15035 370 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
LIMS2-208ENST00000410011 CRTC2Q53ET0 693 aaPredicted RBP15.69■□□□□ 0.1
LIMS2-208ENST00000410011 MRM1Q6IN84 353 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms