RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DDAH2O95865 285 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 KRT16P08779 473 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 PPIBP23284 216 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 PTGER1P34995 402 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 CHI3L1P36222 383 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 CDKN2CP42773 168 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 NUDT2P50583 147 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 NFATC3Q12968 1075 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 CHAF1BQ13112 559 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 FHL5Q5TD97 284 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 PLAG1Q6DJT9 500 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 TCTN3Q6NUS6 607 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 HACD2Q6Y1H2 254 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 DNAJC14Q6Y2X3 702 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 RNF111Q6ZNA4 994 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 SZRD1Q7Z422 152 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 NFAM1Q8NET5 270 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 NUP43Q8NFH3 380 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 M1APQ8TC57 530 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF721Q8TF20 911 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 FAM120BQ96EK7 910 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 VMP1Q96GC9 406 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 IMMP1LQ96LU5 166 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 MS4A4EQ96PG1 132 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 SLC35A5Q9BS91 424 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 OR10A5Q9H207 317 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF71Q9NQZ8 489 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 NDE1Q9NXR1 346 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 MAP10Q9P2G4 905 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 PRODH2Q9UF12 536 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 BCAP29Q9UHQ4 241 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 FBXL4Q9UKA2 621 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 PCDHB14Q9Y5E9 798 aa15.36■□□□□ 0.05
TSPAN4-208ENST00000409531 MED13Q9UHV7 2174 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 RNF103-CHMP3A0A140T963 221 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 OR6C76A6NM76 312 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 B8ZZF3 427 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 HNRNPCL1O60812 293 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 ATP5HO75947 161 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 KRT75O95678 551 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 CBX7O95931 251 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 IGKV3-11P04433 115 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 GSNP06396 782 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 S1PR1P21453 382 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 PTPN6P29350 595 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 CLCN2P51788 898 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 MXRA7P84157 204 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 TP53BP2Q13625 1128 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 BTBD16Q32M84 506 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 DCAF10Q5QP82 559 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 DLEU7Q6UYE1 221 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 OR52R1Q8NGF1 315 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 NCLNQ969V3 563 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 LRRC58Q96CX6 371 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 MAGED4Q96JG8 741 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 CGREF1Q99674 301 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 SH3GL1Q99961 368 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 MESP1Q9BRJ9 268 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 RAD21L1Q9H4I0 556 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 ZNF160Q9HCG1 818 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 CORO2BQ9UQ03 480 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 ERVK-11Q9UQG0 969 aa15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 PCDHGA9Q9Y5G4 932 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-208ENST00000409531 C15orf38-AP3S2A0A0A6YYH1 394 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 TTC36A6NLP5 189 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 CEACAM4O75871 244 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SOX30O94993 753 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SSTR4P31391 388 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SOX18P35713 384 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 MAGEA8P43361 318 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 CPA2P48052 419 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 GPR143P51810 404 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 PRKAG1P54619 331 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SLC37A1P57057 533 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 TXNL4AP83876 142 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 GAB1Q13480 694 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 EXOSC7Q15024 291 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 LACTB2Q53H82 288 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 ZCCHC12Q6PEW1 402 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 ANGPTL8Q6UXH0 198 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SLC29A4Q7RTT9 530 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 ARPINQ7Z6K5 226 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 CLEC1AQ8NC01 280 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 APCDD1LQ8NCL9 501 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 OR8K3Q8NH51 312 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 OR5AK3PQ8NH89 298 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 DOK4Q8TEW6 326 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 ZFP90Q8TF47 636 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 NEURL3Q96EH8 262 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 HOPXQ9BPY8 73 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 TPT1P8Q9HAU6 139 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 IL1RL2Q9HB29 575 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 MMP25Q9NPA2 562 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 ATP13A2Q9NQ11 1180 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 VAPAQ9P0L0 249 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 SLAMF8Q9P0V8 285 aa15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 FAF1Q9UNN5 650 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-208ENST00000409531 BOD1L1Q8NFC6 3051 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms