RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SFXN2Q96NB2 322 aa23.8■■□□□ 1.4
SPIRE1-202ENST00000409402 CCM2LQ9NUG4 571 aaPredicted RBP23.8■■□□□ 1.4
SPIRE1-202ENST00000409402 ERVK-18Q9QC07 812 aa23.8■■□□□ 1.4
SPIRE1-202ENST00000409402 CPNE7Q9UBL6 633 aa23.8■■□□□ 1.4
SPIRE1-202ENST00000409402 NOP16Q9Y3C1 178 aaKnown RBP23.8■■□□□ 1.4
SPIRE1-202ENST00000409402 TRAPPC13A5PLN9 417 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 FMO6PO60774 539 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ANXA3P12429 323 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CELP19835 753 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 COL9A2Q14055 689 aaPredicted RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 EFR3AQ14156 821 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 BEND4Q6ZU67 534 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ARHGAP12Q8IWW6 846 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CCNL2Q96S94 520 aaPredicted RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 RDH14Q9HBH5 336 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ACAD8Q9UKU7 415 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 LAMB4A4D0S4 1761 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 hCG_1807616A0A1W2PRN6 198 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 GGT3PA6NGU5 568 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ERVFC1P60507 584 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CHRFAM7AQ494W8 412 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 KLHDC9Q8NEP7 349 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 OR13C3Q8NGS6 347 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CCDC120Q96HB5 630 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 URM1Q9BTM9 101 aaKnown RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 DMRT3Q9NQL9 472 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 LRIT1Q9P2V4 623 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CNPY1Q3B7I2 92 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC25A25Q6KCM7 469 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 METTL2BQ6P1Q9 378 aaKnown RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 OR7G3Q8NG95 312 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 OR2T4Q8NH00 348 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ATXN7L1Q9ULK2 861 aaPredicted RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC19A2O60779 497 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 MAZP56270 477 aaKnown RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 TAMM41Q96BW9 452 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 OR6C2Q9NZP2 312 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 A0A0U1RQS6 177 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 S100A6P06703 90 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 HOXB9P17482 250 aaPredicted RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC6A8P48029 635 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 KCNAB2Q13303 367 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 MLC1Q15049 377 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 SIX1Q15475 284 aaPredicted RBP23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 TIGD4Q8IY51 512 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 ZNF675Q8TD23 568 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CWH43Q9H720 699 aa23.79■■□□□ 1.4
SPIRE1-202ENST00000409402 CCRL2O00421 344 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 EDN1P05305 212 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 PABPC4LP0CB38 370 aaKnown RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 BOLLQ8N9W6 283 aaKnown RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC39A1Q9NY26 324 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 NKX1-2Q9UD57 310 aaPredicted RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 SH2B3Q9UQQ2 575 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 PCDHGA10Q9Y5H3 936 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 XPNPEP2O43895 674 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 CDKN3Q16667 212 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 HS3ST5Q8IZT8 346 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 SEC14L1Q92503 715 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC41A3Q96GZ6 507 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 PARPBPQ9NWS1 579 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 CD3GP09693 182 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 HTR6P50406 440 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 CTBSQ01459 385 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 C2orf42Q9NWW7 574 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 KCNS2Q9ULS6 477 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 PCDHGA6Q9Y5G7 932 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 ZNF140P52738 457 aaPredicted RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 ZNF829Q3KNS6 432 aaPredicted RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 DNAAF1Q8NEP3 725 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 OR52E2Q8NGJ4 325 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 TM9SF4Q92544 642 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 OR10A4Q9H209 315 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 STARD5Q9NSY2 213 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 C5AR2Q9P296 337 aa23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 NUFIP1Q9UHK0 495 aaKnown RBP23.78■■□□□ 1.4
SPIRE1-202ENST00000409402 LRRN3E7EW58 273 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 PENKP01210 267 aaPredicted RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 TDGQ13569 410 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 LAS2Q8IYD9 372 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 LRRN3Q9H3W5 708 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 TMA7Q9Y2S6 64 aaKnown RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 C13orf42A0A1B0GVH6 325 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 FCER2P06734 321 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 FRKP42685 505 aaPredicted RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 CDH20Q9HBT6 801 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 ENAMQ9NRM1 1142 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 RASAL1O95294 804 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 HOXD9P28356 352 aaPredicted RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 AFF1P51825 1210 aaKnown RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC18B1Q6NT16 456 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 ANKRD54Q6NXT1 300 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 LEG1Q6P5S2 330 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 OR9A2Q8NGT5 310 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 WDR20Q8TBZ3 569 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 DMRTB1Q96MA1 342 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 SLC6A15Q9H2J7 730 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 UBR2Q8IWV8 1755 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 HLA-FP30511 346 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms