RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ARSGQ96EG1 525 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 VMP1Q96GC9 406 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 DIRAS2Q96HU8 199 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 MND1Q9BWT6 205 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 MROQ9BYG7 248 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 PRRG3Q9BZD7 231 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SLC35F4A4IF30 521 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 A8MU76 341 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CASKO14936 926 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 AIFM1O95831 613 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 POLR2CP19387 275 aaPredicted RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 NT5EP21589 574 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 PAICSP22234 425 aaKnown RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 TLX1P31314 330 aaPredicted RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 CD97P48960 835 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 RPS21P63220 83 aaKnown RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 MLIPQ5VWP3 458 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 STEAP3Q658P3 488 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 TMEFF1Q8IYR6 380 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 NATD1Q8N6N6 113 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 OR4C15Q8NGM1 316 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 PIGXQ8TBF5 258 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 DACT3Q96B18 629 aaPredicted RBP11.23□□□□□ -0.61
PCNX4-204ENST00000406949 SFXN1Q9H9B4 322 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 NCKAP1Q9Y2A7 1128 aa11.23□□□□□ -0.61
PCNX4-204ENST00000406949 A0A1W2PS29 197 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 RFXAPO00287 272 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 FFAR1O14842 300 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 MRPS14O60783 128 aaKnown RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 UPK1BO75841 260 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 HOXB2P14652 356 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 KCNJ5P48544 419 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SMSP52788 366 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 IFITM3Q01628 133 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 OXA1LQ15070 435 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 PYDC2Q56P42 97 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 KIAA0907Q7Z7F0 614 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 CADM3Q8N126 398 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 PARP16Q8N5Y8 322 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 LINC00615Q96LM1 132 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 HHIPQ96QV1 700 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 COMMD3Q9UBI1 195 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SH3D21A4FU49 640 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 LRIT2A6NDA9 550 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 METTL15A6NJ78 407 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 FHP07954 510 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SLC15A1P46059 708 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 CHRNEQ04844 493 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 INAVAQ3KP66 663 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 ITPRIPL2Q3MIP1 535 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SLC35F1Q5T1Q4 408 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 OR2G6Q5TZ20 316 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SLC30A6Q6NXT4 461 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 PGBD2Q6P3X8 592 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 FBXO46Q6PJ61 603 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 FBXL6Q8N531 539 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 UBASH3BQ8TF42 649 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 HERVK_113Q902F9 699 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 RNF31Q96EP0 1072 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SIPA1Q96FS4 1042 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 RAB11FIP5Q9BXF6 653 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 THAP10Q9P2Z0 257 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 AP1M2Q9Y6Q5 423 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 CLEC3AO75596 197 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 ADH1BP00325 375 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 DRD2P14416 443 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 NOS3P29474 1203 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 DRD3P35462 400 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 TGM4P49221 684 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 HNRNPA0Q13151 305 aaKnown RBP11.22□□□□□ -0.61
PCNX4-204ENST00000406949 ZNF542PQ5EBM4 170 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 TMEM53Q6P2H8 277 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 OR56A1Q8NGH5 318 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SUN3Q8TAQ9 357 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 WDR34Q96EX3 536 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 MCHR1Q99705 422 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 WFDC6Q9BQY6 131 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 TMED9Q9BVK6 235 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 RACGAP1Q9H0H5 632 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 SCN2AQ99250 2005 aa11.22□□□□□ -0.61
PCNX4-204ENST00000406949 ZAR1LA6NP61 321 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 GNB5O14775 395 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 EN2P19622 333 aaPredicted RBP11.21□□□□□ -0.61
PCNX4-204ENST00000406949 C5AR1P21730 350 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 MMP11P24347 488 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 OPRD1P41143 372 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 RORCP51449 518 aa11.21□□□□□ -0.61
PCNX4-204ENST00000406949 HNRNPFP52597 415 aaKnown RBP11.21□□□□□ -0.61
PCNX4-204ENST00000406949 PCBP3P57721 371 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms