RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FDCSPQ8NFU4 85 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 OR7A2PQ8NGA2 310 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 OR9A2Q8NGT5 310 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 OR8K3Q8NH51 312 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF675Q8TD23 568 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ELP5Q8TE02 316 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 OR5P2Q8WZ92 322 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 TM9SF4Q92544 642 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 MARK4Q96L34 752 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF354BQ96LW1 612 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 AMDHD1Q96NU7 426 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ELAC2Q9BQ52 826 aaKnown RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 MESP1Q9BRJ9 268 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 NUDT9Q9BW91 350 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 GLIPR2Q9H4G4 154 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 RMND5AQ9H871 391 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 C3orf14Q9HBI5 128 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 DDX18Q9NVP1 670 aaKnown RBP9.8□□□□□ -0.84
RPAIN-204ENST00000405578 PTGFRNQ9P2B2 879 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 PRODH2Q9UF12 536 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 BCAP29Q9UHQ4 241 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ADAM21Q9UKJ8 722 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 ERVK-19Q9WJR5 959 aa9.8□□□□□ -0.84
RPAIN-204ENST00000405578 DCHS2Q6V1P9 2916 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 MYO7BQ6PIF6 2116 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 CCDC88CQ9P219 2028 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 A0A087WV62 115 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PRSS51A0A1B0GVH4 220 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 DYTNA2CJ06 578 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 FAM234BA2RU67 622 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PLOD2O00469 737 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 RNASET2O00584 256 aaKnown RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 ANKRD28O15084 1053 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PLOD3O60568 738 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PGRP06401 933 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 IFI6P09912 130 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 DRD4P21917 467 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 POLR2JP52435 117 aaKnown RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PER3P56645 1201 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PRR5P85299 388 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 SF3A3Q12874 501 aaKnown RBP eCLIP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 HSPB3Q12988 150 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 PRICKLE4Q2TBC4 344 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 SPDYE7PQ495Y7 208 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF628Q5EBL2 1059 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 HPS6Q86YV9 775 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 LGI4Q8N135 537 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 TRIML2Q8N7C3 387 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 ADCY4Q8NFM4 1077 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 CIDECQ96AQ7 238 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 LURAP1Q96LR2 239 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 OR52E6Q96RD3 313 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 EPS8L2Q9H6S3 715 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 RUBCNLQ9H714 662 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 FAM120CQ9NX05 1096 aaKnown RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 TAS2R9Q9NYW1 312 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 MAT2BQ9NZL9 334 aa9.79□□□□□ -0.84
RPAIN-204ENST00000405578 COPG1Q9Y678 874 aaKnown RBP9.79□□□□□ -0.84
RPAIN-204ENST00000405578 A0A1W2PS29 197 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 CCDC154A6NI56 674 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 CDK2AP1O14519 115 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 FCHO1O14526 889 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 SNX3O60493 162 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 IGKV3-11P04433 115 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 ITGAMP11215 1152 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 GPX3P22352 226 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 FRKP42685 505 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 RNF4P78317 190 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 PSPHP78330 225 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 Q0VFX4 171 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 FUT7Q11130 342 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 RAPSNQ13702 412 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 MAPRE2Q15555 327 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 ZNHIT3Q15649 155 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 LTB4RQ15722 352 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 MEP1AQ16819 746 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 PLEKHN1Q494U1 663 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 AGKQ53H12 422 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF385BQ569K4 471 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 SPANXN4Q5MJ08 99 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 GKAP1Q5VSY0 366 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 OR4F3Q6IEY1 312 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 CGB2Q6NT52 195 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 PAOXQ6QHF9 649 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 TMEM107Q6UX40 140 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 ISLR2Q6UXK2 745 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 DGAT2L6Q6ZPD8 337 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 MSANTD1Q6ZTZ1 278 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 ZNF551Q7Z340 670 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 SZRD1Q7Z422 152 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 GDF7Q7Z4P5 450 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 RPS19BP1Q86WX3 136 aaKnown RBP9.78□□□□□ -0.84
RPAIN-204ENST00000405578 TAGAPQ8N103 731 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 SIRT6Q8N6T7 355 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 APCDD1LQ8NCL9 501 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 OR4A15Q8NGL6 344 aa9.78□□□□□ -0.84
RPAIN-204ENST00000405578 SUN3Q8TAQ9 357 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms