RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 PABPC4LP0CB38 370 aaKnown RBP17.28■□□□□ 0.36
COL18A1-204ENST00000400337 CNR2P34972 360 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 EIF5AP63241 154 aaKnown RBP17.28■□□□□ 0.36
COL18A1-204ENST00000400337 RPLP0P6Q8NHW5 317 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 SLC39A13Q96H72 371 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 GPR52Q9Y2T5 361 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 GMEB1Q9Y692 573 aa17.28■□□□□ 0.36
COL18A1-204ENST00000400337 ZSCAN5BA6NJL1 495 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 IFNA7P01567 189 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 TFPTP0C1Z6 253 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 ATXN1LP0C7T5 689 aaKnown RBP17.27■□□□□ 0.36
COL18A1-204ENST00000400337 HLA-FP30511 346 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 P2RY2P41231 377 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 ARHGAP11AQ6P4F7 1023 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 LCTLQ6UWM7 567 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 DTX3Q8N9I9 347 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 ZNF559Q9BR84 538 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 SMURF1Q9HCE7 757 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 RARRES3Q9UL19 164 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-204ENST00000400337 OR52E2Q8NGJ4 325 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 TRBV2A0A0J9YWF9 115 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 TEX13DA0A0J9YY54 714 aaPredicted RBP17.27■□□□□ 0.36
COL18A1-204ENST00000400337 SOBPA7XYQ1 873 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 TSPAN4O14817 238 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 PROS1P07225 676 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 GABARAPL2P60520 117 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 CCINQ13939 588 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 TRAM1Q15629 374 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 METTL2BQ6P1Q9 378 aaKnown RBP17.27■□□□□ 0.36
COL18A1-204ENST00000400337 FUNDC2Q9BWH2 189 aa17.27■□□□□ 0.36
COL18A1-204ENST00000400337 M0R3H8 397 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 LRFN4Q6PJG9 635 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 IQCF1Q8N6M8 205 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 OR9Q2Q8NGE9 314 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 RFT1Q96AA3 541 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 ATOH8Q96SQ7 321 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 NUDT15Q9NV35 164 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 BTNL2Q9UIR0 455 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 SH2B3Q9UQQ2 575 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 TMEM14AQ9Y6G1 99 aa17.27■□□□□ 0.35
COL18A1-204ENST00000400337 GPR89AB7ZAQ6 455 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 LILRB3O75022 631 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 GPR89BP0CG08 455 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 DCTP40126 519 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 S100A10P60903 97 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CDK3Q00526 305 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CTSL3PQ5NE16 218 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 FAM69BQ5VUD6 431 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 THAP6Q8TBB0 222 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SLC41A3Q96GZ6 507 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CDCA3Q99618 268 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 MACROD1Q9BQ69 325 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 NTMT1Q9BV86 223 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 MC3RP41968 323 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SELENOWP63302 87 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 PIN1Q13526 163 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 TCTE1Q5JU00 501 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 OR9A2Q8NGT5 310 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 OR4K13Q8NH42 304 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 ADAMTS18Q8TE60 1221 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 HDHD5Q9BXW7 423 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 IRF2BPLQ9H1B7 796 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 RXFP3Q9NSD7 469 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SCP2D1Q9UJQ7 156 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CLEC4EQ9ULY5 219 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF888P0CJ79 500 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 ADRA1AP35348 466 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 MTNR1AP48039 350 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SLC6A11P48066 632 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 Q6ZSR6 202 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 NELL2Q99435 816 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 DISC1C4P0D8 188 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 DDCP20711 480 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CD97P48960 835 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 PLBD1Q6P4A8 553 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 ZNF440Q8IYI8 595 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 FCAMRQ8WWV6 532 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SERINC2Q96SA4 455 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 PHOX2BQ99453 314 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SLC29A1Q99808 456 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 LHX3Q9UBR4 397 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 DHDHQ9UQ10 334 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 C14orf166Q9Y224 244 aaKnown RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 INMT-MINDY4F8WBC2 141 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 SYNGR4O95473 234 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 DRD1P21728 446 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 RAET1LQ5VY80 246 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 CST9Q5W186 159 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 KCTD9Q7L273 389 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 IL22RA1Q8N6P7 574 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 OR5L2Q8NGL0 311 aa17.26■□□□□ 0.35
COL18A1-204ENST00000400337 NMNAT1Q9HAN9 279 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 ATXN7L1Q9ULK2 861 aaPredicted RBP17.26■□□□□ 0.35
COL18A1-204ENST00000400337 TRAPPC13A5PLN9 417 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 RNASET2O00584 256 aaKnown RBP17.25■□□□□ 0.35
COL18A1-204ENST00000400337 EEF1E1O43324 174 aaKnown RBP17.25■□□□□ 0.35
COL18A1-204ENST00000400337 GSTM2P28161 218 aa17.25■□□□□ 0.35
COL18A1-204ENST00000400337 HOXD9P28356 352 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms