RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 NR1D2Q14995 579 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 RGNQ15493 299 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 TEAD2Q15562 447 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF77Q15935 545 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ADPRMQ3LIE5 342 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SYTL3Q4VX76 610 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCDC157Q569K6 752 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SPIN4Q56A73 249 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF805Q5CZA5 627 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ADNP2Q6IQ32 1131 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 C16orf87Q6PH81 154 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 TMEM220Q6QAJ8 160 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 LINC00299Q6ZSB3 139 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 PRSS48Q7RTY5 328 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 EGFL6Q8IUX8 553 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 NRSN1Q8IZ57 195 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CAMKK1Q8N5S9 505 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SLC16A11Q8NCK7 471 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 TMIEQ8NEW7 156 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 OR7G3Q8NG95 312 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 OR4C15Q8NGM1 316 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 HUS1BQ8NHY5 278 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CDC26Q8NHZ8 85 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SNRNP27Q8WVK2 155 aaKnown RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 APH1BQ8WW43 257 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 IPCEF1Q8WWN9 437 aaPredicted RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SORCS1Q8WY21 1168 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 RORBQ92753 470 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CXorf40BQ96DE9 158 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 MED8Q96G25 268 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 VMP1Q96GC9 406 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF347Q96SE7 839 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 RHNO1Q9BSD3 238 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 C1orf43Q9BWL3 253 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 ALOXE3Q9BYJ1 711 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCDC90BQ9GZT6 254 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 REEP1Q9H902 201 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCNB1IP1Q9NPC3 277 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 NECTIN3Q9NQS3 549 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SPHK2Q9NRA0 654 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 KRT84Q9NSB2 600 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 THUMPD1Q9NXG2 353 aaKnown RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 SCN3BQ9NY72 215 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 VPS4AQ9UN37 437 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 TDRKHQ9Y2W6 561 aaKnown RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 MUC22E2RYF6 1773 aaPredicted RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 TCF20Q9UGU0 1960 aaKnown RBP6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCDC88CQ9P219 2028 aa6.4□□□□□ -1.39
CSNK2A1-204ENST00000400227 OR2A25A4D2G3 310 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CLDN25C9JDP6 229 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 FOXE1O00358 373 aaPredicted RBP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CYR61O00622 381 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 SUV39H1O43463 412 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 PCDH7O60245 1069 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 C1orf105O95561 183 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 FGF19O95750 216 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 SLC16A8O95907 504 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CISD3P0C7P0 127 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCL5P13501 91 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 POLR2EP19388 210 aaKnown RBP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 PDHA2P29803 388 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CA8P35219 290 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 IDUAP35475 653 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 TGFBR2P37173 567 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CSNK2BP67870 215 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CXADRP78310 365 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 IL1RL1Q01638 556 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 EEF1A2Q05639 463 aaKnown RBP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 LRRC74AQ0VAA2 488 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 TMEM115Q12893 351 aaPredicted RBP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 PDE7AQ13946 482 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CLCA4Q14CN2 919 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF284Q2VY69 593 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 SPDYE7PQ495Y7 208 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 BCL7AQ4VC05 210 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 UBE2UQ5VVX9 321 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 MED27Q6P2C8 311 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF852Q6ZMS4 543 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 CCDC80Q76M96 950 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 LAS2Q8IYD9 372 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 ENTHD1Q8IYW4 607 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 NAGSQ8N159 534 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 ZNF557Q8N988 423 aaPredicted RBP6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 ATG16L2Q8NAA4 619 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 C11orf65Q8NCR3 313 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 VN1R2Q8NFZ6 395 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 OR4A15Q8NGL6 344 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 OR6Q1Q8NGQ2 317 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 NDNFQ8TB73 568 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 DYNC2LI1Q8TCX1 351 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 DNASE1L2Q92874 299 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 MAL2Q969L2 176 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 NEIL2Q969S2 332 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 TMEM159Q96B96 161 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 BOD1Q96IK1 185 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 TPD52L3Q96J77 140 aa6.39□□□□□ -1.39
CSNK2A1-204ENST00000400227 COQ10AQ96MF6 247 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms