RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SNX4O95219 450 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 SLU7O95391 586 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 CELA3AP09093 270 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 PCSK2P16519 638 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 DDCP20711 480 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 PRPH2P23942 346 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 GRNP28799 593 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 PPICP45877 212 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 MAN2A2P49641 1150 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 EMDP50402 254 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 FBXW4P57775 412 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 BTKQ06187 659 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 LTB4RQ15722 352 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 GXYLT1Q4G148 440 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TRMT12Q53H54 448 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TMEM198Q66K66 360 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 FAM180BQ6P0A1 224 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 C10orf107Q8IVU9 208 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 MARVELD2Q8N4S9 558 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 OR52R1Q8NGF1 315 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 OR5M3Q8NGP4 307 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 CAVIN3Q969G5 261 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 MARVELD3Q96A59 401 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 EBPLQ9BY08 206 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 ITPAQ9BY32 194 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 ANGPTL4Q9BY76 406 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 RUBCNLQ9H714 662 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 PFDN4Q9NQP4 134 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TAS2R7Q9NYW3 318 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 COQ3Q9NZJ6 369 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 CCL27Q9Y4X3 112 aa13.65□□□□□ -0.22
SMIM11A-203ENST00000399299 TRGV5A0A0B4J1U4 118 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 TO15178 435 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 PLOD3O60568 738 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 SLITRK5O94991 958 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 ABCB1P08183 1280 aaPredicted RBP13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 RFPL3SP0C7P2 107 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 DRD5P21918 477 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 MPIP34949 423 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 PSPHP78330 225 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 IFFO1Q0D2I5 559 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 CDSNQ15517 529 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 IKBIPQ70UQ0 350 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 NUP54Q7Z3B4 507 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 CCDC116Q8IYX3 515 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 SIMC1Q8NDZ2 872 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 ASB5Q8WWX0 329 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 SARAFQ96BY9 339 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 RILPQ96NA2 401 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 BTBD9Q96Q07 612 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 GATA5Q9BWX5 397 aaPredicted RBP13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 STMN4Q9H169 189 aaPredicted RBP13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 LDAHQ9H6V9 325 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 PNPLA3Q9NST1 481 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 PCDHGB3Q9Y5G1 929 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 FREM3P0C091 2139 aa13.64□□□□□ -0.23
SMIM11A-203ENST00000399299 FBN2P35556 2912 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 FRG2CA6NGY1 282 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 SLC28A1O00337 649 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 AZIN1O14977 448 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 WDR1O75083 606 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 LRATO95237 230 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 HOXD4P09016 255 aaPredicted RBP13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 NEFHP12036 1026 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 ENDOUP21128 410 aaKnown RBP13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 ACVR2AP27037 513 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 PTGER4P35408 488 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 CASP3P42574 277 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 C2orf80Q0P641 193 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 PLCXD2Q0VAA5 305 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 NNATQ16517 81 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 ERCC6LQ2NKX8 1250 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 CLEC6AQ6EIG7 209 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 NOXRED1Q6NXP6 359 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 ACAD11Q709F0 780 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 SRRM1Q8IYB3 904 aaKnown RBP13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 PRR22Q8IZ63 422 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 MREGQ8N565 214 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 OR9A2Q8NGT5 310 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 NEIL3Q8TAT5 605 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 CA5BP1Q8WTZ4 195 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 RND1Q92730 232 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 HGDQ93099 445 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 OMA1Q96E52 524 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 TMEM41AQ96HV5 264 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 JSRP1Q96MG2 331 aaPredicted RBP13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 BBS4Q96RK4 519 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 TMEM109Q9BVC6 243 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 UBQLN3Q9H347 655 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 MIEF1Q9NQG6 463 aa13.63□□□□□ -0.23
SMIM11A-203ENST00000399299 GPR55Q9Y2T6 319 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms