RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TP53I11O14683 189 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 MRPL3P09001 348 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 HIST1H1TP22492 207 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 MTNR1AP48039 350 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 FAM189A2Q15884 450 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF761Q86XN6 746 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 HS3ST5Q8IZT8 346 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 PNLDC1Q8NA58 520 aaKnown RBP13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR9Q2Q8NGE9 314 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR6N2Q8NGY6 317 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 NELL2Q99435 816 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 DEFB126Q9BYW3 111 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 GPR83Q9NYM4 423 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 EBF1Q9UH73 591 aa13.49□□□□□ -0.25
PCDHGA11-201ENST00000398587 M0R3H8 397 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PGCP20142 388 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 AK4P27144 223 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 RORAP35398 523 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 TAP2Q03519 686 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 HSF2Q03933 536 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 NFATC3Q12968 1075 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 DEFB110Q30KQ9 67 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ALKBH2Q6NS38 261 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 TMEM207Q6UWW9 146 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC44A3Q8N4M1 653 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ALKBH4Q9NXW9 302 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PCDHA9Q9Y5H5 950 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 A0A0J9YY10 115 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CBX5P45973 191 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CTBSQ01459 385 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CAMK1Q14012 370 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 TANGO2Q6ICL3 276 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 KCTD18Q6PI47 426 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 NRMQ8IXM6 262 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 RNF175Q8N4F7 328 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR5K2Q8NHB8 316 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 UHRF1Q96T88 793 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 BCL7BQ9BQE9 202 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CPPED1Q9BRF8 314 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PLCL2Q9UPR0 1127 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 BAIAP2Q9UQB8 552 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 TMEM14AQ9Y6G1 99 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SMIM30A4D0T7 59 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 POLR1CO15160 346 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SCO2O43819 266 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF888P0CJ79 500 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 MTHFD2P13995 350 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC6A9P48067 706 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 MRPS21P82921 87 aaKnown RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ALG10BQ5I7T1 473 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 CENPSQ8N2Z9 138 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 JAGN1Q8N5M9 183 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR2T11Q8NH01 316 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PNPLA2Q96AD5 504 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PINK1Q9BXM7 581 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 B3GNT4Q9C0J1 378 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PDFQ9HBH1 243 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRSS16Q9NQE7 514 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRSS38A1L453 326 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PRAMEF2O60811 474 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PYCR1P32322 319 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SOX9P48436 509 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 POU4F2Q12837 409 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 GAS6Q14393 721 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLCO4C1Q6ZQN7 724 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 PELI3Q8N2H9 469 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR9A2Q8NGT5 310 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC41A3Q96GZ6 507 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 HOXD1Q9GZZ0 328 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 NANSQ9NR45 359 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 ACSS1Q9NUB1 689 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 MAU2Q9Y6X3 613 aa13.48□□□□□ -0.25
PCDHGA11-201ENST00000398587 METTL21EPA6NDL7 271 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 KIAA0513O60268 411 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 HOXC12P31275 282 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 AHRP35869 848 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR3A3P47888 321 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR3A2P47893 321 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 LHX8Q68G74 356 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF627Q7L945 461 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 UBE2Q1Q7Z7E8 422 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF548Q8NEK5 533 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 HAVCR1Q96D42 359 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 P2RY12Q9H244 342 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 DPAGT1Q9H3H5 408 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 PIGUQ9H490 435 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 PSMD9O00233 223 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 CXCL10P02778 98 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 S100A1P23297 94 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 HBA1P69905 142 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms