RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TIGD3Q6B0B8 471 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF627Q7L945 461 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 YAF2Q8IY57 180 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 WFIKKN2Q8TEU8 576 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 TTTY10Q9BZA0 68 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 RSPH9Q9H1X1 276 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-205ENST00000397611 IKZF2Q9UKS7 526 aa5.18□□□□□ -1.58
PTPRD-205ENST00000397611 ABHD14A-ACY1A0A1B0GW23 586 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC9A3R1O14745 358 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SPDEFO95238 335 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 HPGDP15428 266 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CCND3P30281 292 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PRAMEF19Q5SWL8 479 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC35F1Q5T1Q4 408 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ULK3Q6PHR2 472 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 FRRS1Q6ZNA5 592 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC22A8Q8TCC7 542 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CXorf40AQ8TE69 158 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CHFRQ96EP1 664 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ELMOD3Q96FG2 381 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 FOLH1BQ9HBA9 442 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 BIN3Q9NQY0 253 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 FBXL3Q9UKT7 428 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 A0A1W2PRQ8 180 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SCAMP2O15127 329 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 RLN2P04090 185 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ALDOBP05062 364 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SAGP10523 405 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CKBP12277 381 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CHMP24386 653 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CCR7P32248 378 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 APLP1P51693 650 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 EPHB3P54753 998 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 RAG2P55895 527 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 GK2Q14410 553 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF770Q6IQ21 691 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC43A2Q8N370 569 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 C2orf73Q8N5S3 287 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 POGLUT1Q8NBL1 392 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 INO80EQ8NBZ0 244 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 GPR26Q8NDV2 337 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DBF4BQ8NFT6 615 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ZC3HAV1LQ96H79 300 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TOX2Q96NM4 488 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC35A5Q9BS91 424 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TNFRSF10DQ9UBN6 386 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TEX13CA0A0J9YWL9 993 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 RIIAD1A6NNX1 92 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SAP18O00422 153 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PDCD5O14737 125 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PAHP00439 452 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 IFNGP01579 166 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TSFMP43897 325 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TM4SF4P48230 202 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 NOGQ13253 232 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DSG2Q14126 1118 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CCL14Q16627 93 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TATDN3Q17R31 274 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 MICAQ29983 383 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 KRBOX4Q5JUW0 171 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF697Q5TEC3 545 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PYHIN1Q6K0P9 492 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CD200R1LQ6Q8B3 271 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CRTC1Q6UUV9 634 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TMED4Q7Z7H5 227 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TMPRSS11BQ86T26 416 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 OAFQ86UD1 273 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ARMC10Q8N2F6 343 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 NEIL3Q8TAT5 605 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 RIPOR3Q96MK2 946 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 MTERF1Q99551 399 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 MTG2Q9H4K7 406 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 EXO5Q9H790 373 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 EVLQ9UI08 416 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 TTC3P53804 2025 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DOCK4Q8N1I0 1966 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 LOC105369274A0A096LPK9 316 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PROM1O43490 865 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PCDH7O60245 1069 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 FGBP02675 491 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ADORA3P0DMS8 318 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF3P17036 446 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DDX6P26196 483 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 S100A10P60903 97 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 CARD16Q5EG05 197 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 MED27Q6P2C8 311 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 ENTHD1Q8IYW4 607 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC22A15Q8IZD6 547 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 OR4N4Q8N0Y3 316 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SLC5A8Q8N695 610 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 OR5P2Q8WZ92 322 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 AP2M1Q96CW1 435 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 LINC00615Q96LM1 132 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 BCL2L14Q9BZR8 327 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 PRMT8Q9NR22 394 aaPredicted RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 KCNN3Q9UGI6 736 aa5.17□□□□□ -1.58
PTPRD-205ENST00000397611 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
PTPRD-205ENST00000397611 SPACA6W5XKT8 324 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms