RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 J3QW42 95 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 FOXE1O00358 373 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 EEF1E1O43324 174 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 UGDHO60701 494 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 KERAO60938 352 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ERN1O75460 977 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 EEDO75530 441 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CBR3O75828 277 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 PIAS1O75925 651 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 RCBTB2O95199 551 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 LRATO95237 230 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CLPSP04118 112 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 GSTA2P09210 222 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 TMIGD3P0DMS9 266 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 NR2F6P10588 404 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CYP4B1P13584 511 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 PIK3R1P27986 724 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CRABP2P29373 138 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 GP5P40197 560 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 PCYT1AP49585 367 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 AGFG1P52594 562 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 NAGLUP54802 743 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 RPS13P62277 151 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 SNTA1Q13424 505 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 GAB1Q13480 694 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 DDX39BQ13838 428 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 TOMM20Q15388 145 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 EIPR1Q53HC9 387 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 WIPI1Q5MNZ9 446 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 GRTP1Q5TC63 336 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 BICRALQ6AI39 1079 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 SCIMPQ6UWF3 145 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ENPP6Q6UWR7 440 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 C3orf62Q6ZUJ4 267 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 NUP54Q7Z3B4 507 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 LRRC75A-AS1Q8N1F1 130 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 TEX9Q8N6V9 391 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF615Q8N8J6 731 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 OR4K14Q8NGD5 310 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 OR1J4Q8NGS1 313 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 UBTD2Q8WUN7 234 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ADIPOR1Q96A54 375 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 REPS1Q96D71 796 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ARSGQ96EG1 525 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ATOH8Q96SQ7 321 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 MTERF1Q99551 399 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 SMR3AQ99954 134 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 SFXN3Q9BWM7 321 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 RBM24Q9BX46 236 aaKnown RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ZNF717Q9BY31 904 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 OR10A5Q9H207 317 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 PIGMQ9H3S5 423 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ALG9Q9H6U8 611 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 TEX10Q9NXF1 929 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-208ENST00000397204 CFL2Q9Y281 166 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 ANGPTL3Q9Y5C1 460 aa7.98□□□□□ -1.13
CAPN3-208ENST00000397204 FREM3P0C091 2139 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ROS1P08922 2347 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 A0A0A6YYD5 115 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SH3D21A4FU49 640 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 GLOD5A6NK44 160 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 FAM159BA6NKW6 160 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SYCE1LA8MT33 242 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 A8MXE2 369 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SUPT3HB4E1H0 165 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 CCDC188H7C350 402 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 UBXN8O00124 270 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PGRMC2O15173 223 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 EIF3HO15372 352 aaKnown RBP eCLIP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 TMPRSS11DO60235 418 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ICOSLGO75144 302 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SUPT3HO75486 399 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PRKRAO75569 313 aaKnown RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 HEXAP06865 529 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ABCB1P08183 1280 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 LTA4HP09960 611 aaKnown RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 KRT15P19012 456 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 S1PR1P21453 382 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 CHMP24386 653 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ABCD3P28288 659 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PTPN6P29350 595 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SSTR1P30872 391 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SSTR4P31391 388 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 XKP51811 444 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PCBP2Q15366 365 aaKnown RBP eCLIP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SLC30A6Q6NXT4 461 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PRSS57Q6UWY2 283 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 RAPH1Q70E73 1250 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 CCDC91Q7Z6B0 441 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ADGRE4PQ86SQ3 457 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 TBC1D1Q86TI0 1168 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 YRDCQ86U90 279 aaKnown RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 CXorf67Q86X51 503 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 MYLK4Q86YV6 388 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 CREG2Q8IUH2 290 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 GALNT12Q8IXK2 581 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 RNF175Q8N4F7 328 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 C9orf106Q8NAJ2 232 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 FAM83FQ8NEG4 500 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms