RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PPP2R2DQ66LE6 453 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 OR5AK2Q8NH90 309 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ARNTL2Q8WYA1 636 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 ZBTB20Q9HC78 741 aaPredicted RBP13.35□□□□□ -0.27
COL4A3-202ENST00000396578 KCNJ16Q9NPI9 418 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
COL4A3-202ENST00000396578 C17orf113A0A1B0GUU1 675 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SLC22A5O76082 557 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 RFC2P35250 354 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 DIO3P55073 304 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 GALK2Q01415 458 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TRAPPC6BQ86SZ2 158 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 NOXA1Q86UR1 476 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 GATSQ8NAP1 163 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ABRACLQ9P1F3 81 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SHPRHQ149N8 1683 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 BCL9LQ86UU0 1499 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SLIT2O94813 1529 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TRAPPC13A5PLN9 417 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TYRP1P17643 537 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ELOAQ14241 798 aaKnown RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF695Q8IW36 515 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SPRYD4Q8WW59 207 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 XPNPEP1Q9NQW7 623 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SLC16A5O15375 505 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 FOXD2O60548 495 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 EPOP01588 193 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 PRKACBP22694 351 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 CRYZQ08257 329 aaKnown RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SSX2Q16385 188 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 LBX2Q6XYB7 198 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 RELL1Q8IUW5 271 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF578Q96N58 590 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 GPRC5BQ9NZH0 403 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 PCDHGA6Q9Y5G7 932 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 NID2Q14112 1375 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 CDC123O75794 336 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TGM6O95932 706 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TYRP14679 529 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 MS4A13Q5J8X5 152 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SGPP2Q8IWX5 399 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 KLHL33A6NCF5 533 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 BCAS1O75363 584 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ACRV1P26436 265 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 VSX2P58304 361 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 PXYLP1Q8TE99 480 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SPIN2AQ99865 258 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 SPIN2BQ9BPZ2 258 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 LHPPQ9H008 270 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 GKN1Q9NS71 199 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 PPP4R1LQ9P1A2 415 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 MYOM1P52179 1685 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 CCDC88CQ9P219 2028 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 DCNP07585 359 aaKnown RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 DRD5P21918 477 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 TAS2R31P59538 309 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 NKX3-2P78367 333 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 FOXK1P85037 733 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 FAPQ12884 760 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF648Q5T619 568 aaPredicted RBP13.34□□□□□ -0.27
COL4A3-202ENST00000396578 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 ZFP41Q8N8Y5 198 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 RBCK1Q9BYM8 510 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 GIMAP2Q9UG22 337 aa13.34□□□□□ -0.27
COL4A3-202ENST00000396578 JRKO75564 520 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 CCINQ13939 588 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 TMEM150AQ86TG1 271 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 OR2T35Q8NGX2 323 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 ADAMTS19Q8TE59 1207 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 RNF128Q8TEB7 428 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 B4GALT7Q9UBV7 327 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 KCNK6Q9Y257 313 aa13.33□□□□□ -0.27
COL4A3-202ENST00000396578 LSM5Q9Y4Y9 91 aaKnown RBP13.33□□□□□ -0.27
COL4A3-202ENST00000396578 ZNF705GA8MUZ8 300 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SUMF2Q8NBJ7 301 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 BCO2Q9BYV7 579 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 ZNF436Q9C0F3 470 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 DCCP43146 1447 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 GGT3PA6NGU5 568 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 VSTM2BA6NLU5 285 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SERPINA7P05543 415 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 CAV2P51636 162 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 MEF2AQ02078 507 aaPredicted RBP13.33□□□□□ -0.28
COL4A3-202ENST00000396578 PTPRRQ15256 657 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 TECRLQ5HYJ1 363 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 SAMD10Q9BYL1 202 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
COL4A3-202ENST00000396578 LYRM1O43325 122 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms