RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KCNJ16Q9NPI9 418 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 MIEF1Q9NQG6 463 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 OXSMQ9NWU1 459 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 EHD3Q9NZN3 535 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 HEY2Q9UBP5 337 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF639Q9UID6 485 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 HRH3Q9Y5N1 445 aa12.62□□□□□ -0.39
CXCL12-205ENST00000395794 LRRC3CA6NJW4 275 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 UBFD1O14562 309 aaKnown RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 TRIM3O75382 744 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 PPM1BO75688 479 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 RFPL3SP0C7P2 107 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 UROSP10746 265 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 PCSK2P16519 638 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 KRT20P35900 424 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 CASP3P42574 277 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 PPICP45877 212 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 RAE1P78406 368 aaKnown RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 MRPS35P82673 323 aaKnown RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF763Q0D2J5 394 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 C2orf80Q0P641 193 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 MGAT2Q10469 447 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 CDSNQ15517 529 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 LTB4RQ15722 352 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 TRMT12Q53H54 448 aaKnown RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 LIPMQ5VYY2 423 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 FAM219BQ5XKK7 198 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 TRIM46Q7Z4K8 759 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 HOMEZQ8IX15 550 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 MARVELD2Q8N4S9 558 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 LILRB4Q8NHJ6 448 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 FAM76AQ8TAV0 307 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF675Q8TD23 568 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 CTHRC1Q96CG8 243 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 OMA1Q96E52 524 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 PROK2Q9HC23 129 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 SLC35C2Q9NQQ7 365 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 SIRT5Q9NXA8 310 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 TNFRSF10DQ9UBN6 386 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 RNF6Q9Y252 685 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 WBP11Q9Y2W2 641 aaKnown RBP12.61□□□□□ -0.39
CXCL12-205ENST00000395794 NOTCH2Q04721 2471 aa12.61□□□□□ -0.39
CXCL12-205ENST00000395794 C15orf38-AP3S2A0A0A6YYH1 394 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 FAM90A27PA6NNH2 459 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 ENO4A6NNW6 628 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 RSL1D1O76021 490 aaKnown RBP12.6□□□□□ -0.39
CXCL12-205ENST00000395794 CBX7O95931 251 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 CHEK2O96017 543 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 PRF1P14222 555 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 DDCP20711 480 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 ELAVL4P26378 380 aaKnown RBP12.6□□□□□ -0.39
CXCL12-205ENST00000395794 GCKP35557 465 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 TRPC1P48995 793 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 FOXA1P55317 472 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 NUP107P57740 925 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 PSPHP78330 225 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 SF3B4Q15427 424 aaKnown RBP eCLIP12.6□□□□□ -0.39
CXCL12-205ENST00000395794 ZNF628Q5EBL2 1059 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 C1orf185Q5T7R7 199 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 FAM9CQ8IZT9 166 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-205ENST00000395794 OR9A2Q8NGT5 310 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 NEIL3Q8TAT5 605 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 KAT2AQ92830 837 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 TMCO6Q96DC7 493 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 TTYH2Q9BSA4 534 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 TRMOQ9BU70 441 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 SLC6A15Q9H2J7 730 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 ANKZF1Q9H8Y5 726 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 KLRF1Q9NZS2 232 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 DTX4Q9Y2E6 619 aa12.6□□□□□ -0.39
CXCL12-205ENST00000395794 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 C19orf84I3L1E1 186 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SLC28A1O00337 649 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 RGS14O43566 566 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 TRIM13O60858 407 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SEC22BO75396 215 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 REM1O75628 298 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 GLI4P10075 376 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SSTR2P30874 369 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 NTSP30990 170 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 EMDP50402 254 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 DUSP2Q05923 314 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SLC18A2Q05940 514 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SNTA1Q13424 505 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 BICRALQ6AI39 1079 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 TIGD3Q6B0B8 471 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 ANGPTL8Q6UXH0 198 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
CXCL12-205ENST00000395794 CCDC71Q8IV32 467 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-205ENST00000395794 C10orf107Q8IVU9 208 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 RPRMLQ8N4K4 120 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 OR1J4Q8NGS1 313 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 DTNBP1Q96EV8 351 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 TMEM41AQ96HV5 264 aa12.59□□□□□ -0.39
CXCL12-205ENST00000395794 METTL2AQ96IZ6 378 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms