RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CIARTQ8N365 385 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-203ENST00000394925 ZNF592Q92610 1267 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 WNT2BQ93097 391 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 OMA1Q96E52 524 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 PIGMQ9H3S5 423 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 EHD3Q9NZN3 535 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 KLRF1Q9NZS2 232 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 BCAP29Q9UHQ4 241 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 EXO1Q9UQ84 846 aaKnown RBP19.2■□□□□ 0.66
TRAF4-203ENST00000394925 ACOT9Q9Y305 439 aa19.2■□□□□ 0.66
TRAF4-203ENST00000394925 SMPD2O60906 423 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 CBR3O75828 277 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 KLK1P06870 262 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 RHOXF2BP0C7M4 288 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 CNTFP26441 200 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 CPOXP36551 454 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 STARP49675 285 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 ALDH18A1P54886 795 aaKnown RBP19.19■□□□□ 0.66
TRAF4-203ENST00000394925 DIO3P55073 304 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 IRF9Q00978 393 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 TMEM81Q6P7N7 255 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 FAM111BQ6SJ93 734 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 PRIMA1Q86XR5 153 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 CENPLQ8N0S6 344 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-203ENST00000394925 L3MBTL4Q8NA19 623 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 RHEBL1Q8TAI7 183 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 COX4I2Q96KJ9 171 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 SERPINI1Q99574 410 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 G6PC3Q9BUM1 346 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 ITPAQ9BY32 194 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 BRINP2Q9C0B6 783 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 OR2B2Q9GZK3 357 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 ACBD3Q9H3P7 528 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 C6orf203Q9P0P8 240 aaPredicted RBP19.19■□□□□ 0.66
TRAF4-203ENST00000394925 CSPG4Q6UVK1 2322 aa19.19■□□□□ 0.66
TRAF4-203ENST00000394925 A8MXE2 369 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 H7C1Q1 480 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 UGT2B11O75310 529 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 SEMA3DO95025 777 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 GSTA2P09210 222 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 ARL1P40616 181 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-203ENST00000394925 PAFAH1B1P43034 410 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 PLCXD2Q0VAA5 305 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 SNTA1Q13424 505 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 GAB1Q13480 694 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 EXOSC7Q15024 291 aaKnown RBP19.18■□□□□ 0.66
TRAF4-203ENST00000394925 WDSUB1Q8N9V3 476 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 LCORQ96JN0 433 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-203ENST00000394925 CDK15Q96Q40 435 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 UCN2Q96RP3 112 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 WHRNQ9P202 907 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 CLCF1Q9UBD9 225 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 PACSIN3Q9UKS6 424 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 CFL2Q9Y281 166 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 TESMINQ9Y4I5 508 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 SAR1BQ9Y6B6 198 aa19.18■□□□□ 0.66
TRAF4-203ENST00000394925 HIVEP2P31629 2446 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 KIAA1324LA8MWY0 1029 aaPredicted RBP19.17■□□□□ 0.66
TRAF4-203ENST00000394925 SMAD7O15105 426 aaKnown RBP19.17■□□□□ 0.66
TRAF4-203ENST00000394925 SIX3O95343 332 aaPredicted RBP19.17■□□□□ 0.66
TRAF4-203ENST00000394925 CLDN9O95484 217 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 PCSK6P29122 969 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 FAM83EQ2M2I3 478 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 PRICKLE4Q2TBC4 344 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 CCNYL2Q5T2Q4 361 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 IFNEQ86WN2 208 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 GRAMD2AQ8IUY3 354 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 LRRC75A-AS1Q8N1F1 130 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 SIMC1Q8NDZ2 872 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 Q96MF0 132 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 MDFIQ99750 246 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 PIP5K1AQ99755 562 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 ERP44Q9BS26 406 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 TAS2R10Q9NYW0 307 aa19.17■□□□□ 0.66
TRAF4-203ENST00000394925 CPSF2Q9P2I0 782 aaKnown RBP19.17■□□□□ 0.66
TRAF4-203ENST00000394925 A0A087X1B8 175 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 PRAMEF25A6NGN4 478 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 PLOD2O00469 737 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
TRAF4-203ENST00000394925 FEN1P39748 380 aaKnown RBP19.16■□□□□ 0.66
TRAF4-203ENST00000394925 LHX2P50458 406 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 GFRA1P56159 465 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 FAM27E3Q08E93 113 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 MGAT2Q10469 447 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 MAP4K2Q12851 820 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 SCIMPQ6UWF3 145 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 ADCY4Q8NFM4 1077 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 PIGTQ969N2 578 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 ATP6V1E2Q96A05 226 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 CTHRC1Q96CG8 243 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 WFIKKN1Q96NZ8 548 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 MRPL1Q9BYD6 325 aaKnown RBP19.16■□□□□ 0.66
TRAF4-203ENST00000394925 NOL11Q9H8H0 719 aaKnown RBP19.16■□□□□ 0.66
TRAF4-203ENST00000394925 MAT2BQ9NZL9 334 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 PLLPQ9Y342 182 aa19.16■□□□□ 0.66
TRAF4-203ENST00000394925 TNPO3Q9Y5L0 923 aaKnown RBP19.16■□□□□ 0.66
TRAF4-203ENST00000394925 RTTNQ86VV8 2226 aa19.15■□□□□ 0.66
TRAF4-203ENST00000394925 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.15■□□□□ 0.66
TRAF4-203ENST00000394925 A0A1W2PNV4 684 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms