RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PLEKHN1Q494U1 663 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CDNFQ49AH0 187 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 KANK2Q63ZY3 851 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SLC18B1Q6NT16 456 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 OR52B6Q8NGF0 335 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CASD1Q96PB1 797 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 TUBA1CQ9BQE3 449 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RPH3AQ9Y2J0 694 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RNF215Q9Y6U7 377 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 A0A0J9YY10 115 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CD8B2A6NJW9 211 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RBBP9O75884 186 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RGS9O75916 674 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CD8BP10966 210 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 GNMTQ14749 295 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ATXN7L3Q14CW9 347 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RSU1Q15404 277 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 LRRTM3Q86VH5 581 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 LRRC15Q8TF66 581 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ALOXE3Q9BYJ1 711 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 HAPLN2Q9GZV7 340 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM168Q9H0V1 697 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 PTRH2Q9Y3E5 179 aaKnown RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF451Q9Y4E5 1061 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 IGKV6-21A0A0C4DH24 114 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 A0A0G2JPF8 293 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SLC22A31A6NKX4 558 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 HNRNPCL3B7ZW38 293 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 POLR1CO15160 346 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SLITRK5O94991 958 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 HNRNPCL4P0DMR1 293 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ETFAP13804 333 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CERS1P27544 350 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SERTAD2Q14140 314 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ZNF829Q3KNS6 432 aaPredicted RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM236Q5W0B7 351 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 LRRN1Q6UXK5 716 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 OR6C4Q8NGE1 309 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ASB12Q8WXK4 309 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 HDAC2Q92769 488 aaKnown RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 C12orf43Q96C57 262 aaKnown RBP9.88□□□□□ -0.83
COL4A6-203ENST00000394872 STARD5Q9NSY2 213 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 KCNIP1Q9NZI2 227 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 ABCG2Q9UNQ0 655 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 PHYHO14832 338 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 KDELR2P33947 212 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 SFTPDP35247 375 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CLDN8P56748 225 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 RELL1Q8IUW5 271 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CLECL1Q8IZS7 167 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 CLEC1AQ8NC01 280 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 MFSD8Q8NHS3 518 aa9.88□□□□□ -0.83
COL4A6-203ENST00000394872 NARSO43776 548 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CNOT4O95628 575 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 AFF1P51825 1210 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 EPHA4P54764 986 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 APOFQ13790 326 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 LRRC37A5PQ49AS3 106 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 FAM180BQ6P0A1 224 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 XKRXQ6PP77 449 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SLC41A3Q96GZ6 507 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MTHFD2LQ9H903 347 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 KCMF1Q9P0J7 381 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 REV1Q9UBZ9 1251 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 IGKV6D-21A0A0A0MT36 114 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SGK494L7N484 410 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MT-ND2P03891 347 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 ITGB7P26010 798 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 KLBQ86Z14 1044 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CREB3L1Q96BA8 519 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 FBXL8Q96CD0 374 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MKS1Q9NXB0 559 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 C17orf105B2RV13 164 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 H0YAE9 185 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TYROBPO43914 113 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RASAL1O95294 804 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 DIRAS3O95661 229 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 MAS1P04201 325 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RAB15P59190 212 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 RHEBQ15382 184 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SF3B4Q15427 424 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 PRR22Q8IZ63 422 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CD300LFQ8TDQ1 290 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 TMEM19Q96HH6 336 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 OR5B2Q96R09 309 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 PTBP2Q9UKA9 531 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 KAT6AQ92794 2004 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 NPIPB15A6NHN6 443 aaPredicted RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 EEF1E1O43324 174 aaKnown RBP9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SNAP29O95721 258 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CER1O95813 267 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SLC16A8O95907 504 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 IFNA2P01563 188 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CD97P48960 835 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 IST1P53990 364 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 CTXN1P60606 82 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 COMMD6Q7Z4G1 85 aa9.87□□□□□ -0.83
COL4A6-203ENST00000394872 SLC39A11Q8N1S5 342 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms