RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ADRB3P13945 408 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SSTR4P31391 388 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 RPS19P39019 145 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 MMP12P39900 470 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 BTN3A2P78410 334 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC3A1Q07837 685 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 BTBD16Q32M84 506 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 NDUFAF6Q330K2 333 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 LRIT3Q3SXY7 679 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 TMEM107Q6UX40 140 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 VITQ6UXI7 678 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF438Q7Z4V0 828 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 OR2L2Q8NH16 312 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SNX33Q8WV41 574 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 PDXPQ96GD0 296 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 OR4K3Q96R72 315 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 A4GALTQ9NPC4 353 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CARD8Q9Y2G2 431 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 SNX11Q9Y5W9 270 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 NYNRINQ9P2P1 1898 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 HYKKA2RU49 373 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CD8B2A6NJW9 211 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CD8BP10966 210 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CBLP22681 906 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 ARHGAP19Q14CB8 494 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 ZNF791Q3KP31 576 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 KLBQ86Z14 1044 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 HDDC3Q8N4P3 179 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CPA6Q8N4T0 437 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 KIAA1958Q8N8K9 716 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 OR8K5Q8NH50 307 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 OR14C36Q8NHC7 312 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 LILRB4Q8NHJ6 448 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 POLDIP3Q9BY77 421 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 IL21Q9HBE4 155 aa11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 ACSS1Q9NUB1 689 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3DA0A087WVF3 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3IA0A087WXS9 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3EA0A087X179 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3KA0A087X1G2 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3FA6NER0 549 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3LB9A6J9 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CASC3O15234 703 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PRKYO43930 277 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 KHDRBS3O75525 346 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3HP0C7X1 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SYN1P17600 705 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CFL1P23528 166 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PITPNAQ00169 270 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM214AQ32MH5 1076 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SLC35F1Q5T1Q4 408 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 MLIPQ5VWP3 458 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3GQ6DHY5 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3CQ6IPX1 549 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 FAM220AQ7Z4H9 259 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TBC1D3Q8IZP1 549 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 ACBD7Q8N6N7 88 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 APH1BQ8WW43 257 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 AKAP1Q92667 903 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 RAB7BQ96AH8 199 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 YIPF2Q9BWQ6 316 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 EPHX3Q9H6B9 360 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SLA2Q9H6Q3 261 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 TXNL4BQ9NX01 149 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 GPR34Q9UPC5 381 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CCL26Q9Y258 94 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 LRRC72A6NJI9 287 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 LYRM1O43325 122 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 OR2B3O76000 313 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SERPINA3P01011 423 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 MT-ND5P03915 603 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PEPDP12955 493 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PTNP21246 168 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 GPR4P46093 362 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 KCNJ5P48544 419 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 PDGFRLQ15198 375 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 OR2G6Q5TZ20 316 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 C11orf88Q6PI97 169 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 VN1R5Q7Z5H4 357 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 UXS1Q8NBZ7 420 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 OR52P1PQ8NH57 321 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 RFT1Q96AA3 541 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 SAP130Q9H0E3 1048 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 CNIH4Q9P003 139 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 DIMT1Q9UNQ2 313 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 HEBP2Q9Y5Z4 205 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 C17orf113A0A1B0GUU1 675 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 B3GALT2O43825 422 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 APODP05090 189 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 ACP2P11117 423 aa11.03□□□□□ -0.64
UBE2D3-209ENST00000394804 IFI30P13284 250 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms