RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 IL3P08700 152 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 KRT15P19012 456 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PTPN6P29350 595 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 UQCRC1P31930 480 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PTGDSP41222 190 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 AGFG1P52594 562 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 RAE1P78406 368 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 HMGCS1Q01581 520 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PLCXD2Q0VAA5 305 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 SLC25A35Q3KQZ1 300 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 SCIMPQ6UWF3 145 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 YRDCQ86U90 279 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 MNS1Q8NEH6 495 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 C17orf47Q8NEP4 570 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 CTHRC1Q96CG8 243 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 NTNG2Q96CW9 530 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 VPS29Q9UBQ0 182 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 UTS2RQ9UKP6 389 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 MAPRE3Q9UPY8 281 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 CAMK2AQ9UQM7 478 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 TIMM22Q9Y584 194 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 AKAP6Q13023 2319 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 GUCY1B2O75343 617 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 ZWINTO95229 277 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 ESRRBO95718 433 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 FAM153BP0C7A2 387 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 BMP7P18075 431 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 EMDP50402 254 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 NAGLUP54802 743 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 FAM153CQ494X1 144 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 GLE1Q53GS7 698 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 CES4AQ5XG92 561 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 TIGD3Q6B0B8 471 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 VASNQ6EMK4 673 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 ARSKQ6UWY0 536 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PLXDC2Q6UX71 529 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 GPRIN3Q6ZVF9 776 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 GSPT2Q8IYD1 628 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 CCDC116Q8IYX3 515 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 FAM83FQ8NEG4 500 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 KAT2AQ92830 837 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 EXOSC8Q96B26 276 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 APIPQ96GX9 242 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 TMEM41AQ96HV5 264 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 LCORQ96JN0 433 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF382Q96SR6 550 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 SECISBP2Q96T21 854 aaKnown RBP15.14■□□□□ 0.01
PTPRK-208ENST00000392449 EBPLQ9BY08 206 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 UGT2B28Q9BY64 529 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 SERHLQ9NQF3 203 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PFDN4Q9NQP4 134 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 DLGAP4Q9Y2H0 992 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 PCDHGB3Q9Y5G1 929 aa15.14■□□□□ 0.01
PTPRK-208ENST00000392449 RIPK2O43353 540 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 PCDH7O60245 1069 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 ICOSLGO75144 302 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 EPPINO95925 133 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 ABHD2P08910 425 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 TAC1P20366 129 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF136P52737 540 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 CORO7P57737 925 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 BTKQ06187 659 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 RASA2Q15283 850 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF628Q5EBL2 1059 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 POMZP3Q6PJE2 187 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 TIFABQ6ZNK6 161 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 OR1J4Q8NGS1 313 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 OR9A2Q8NGT5 310 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 RDH11Q8TC12 318 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 METTL6Q8TCB7 284 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 WDYHV1Q96HA8 205 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 TRIB1Q96RU8 372 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 SH3GL2Q99962 352 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 FAIM2Q9BWQ8 316 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 OSBPL11Q9BXB4 747 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 PRDM14Q9GZV8 571 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 LIME1Q9H400 295 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 CRIM1Q9NZV1 1036 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 ZNF780BQ9Y6R6 833 aa15.13■□□□□ 0.01
PTPRK-208ENST00000392449 HSPB2A8KAH6 182 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 C17orf51A8MQB3 221 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 AHRRA9YTQ3 701 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 KRT6AP02538 564 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 KRT6BP04259 564 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 HMOX2P30519 316 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 CEACAM8P31997 349 aaPredicted RBP15.12■□□□□ 0.01
PTPRK-208ENST00000392449 KRT6CP48668 564 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 FOXA1P55317 472 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 CSTF3Q12996 717 aaKnown RBP15.12■□□□□ 0.01
PTPRK-208ENST00000392449 HSPB2Q16082 182 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 PRSS53Q2L4Q9 553 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 TMBIM1Q969X1 311 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 DOCK7Q96N67 2140 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 GPATCH1Q9BRR8 931 aaKnown RBP15.12■□□□□ 0.01
PTPRK-208ENST00000392449 EPB41L4BQ9H329 900 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 NMRK1Q9NWW6 199 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 KLRF1Q9NZS2 232 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 TBK1Q9UHD2 729 aa15.12■□□□□ 0.01
PTPRK-208ENST00000392449 MCM8Q9UJA3 840 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms