RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 STK19P49842 368 aaPredicted RBP16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SMAD3P84022 425 aaKnown RBP16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TDGQ13569 410 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SLC36A4Q6YBV0 504 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 DDX53Q86TM3 631 aaKnown RBP16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GPALPP1Q8IXQ4 340 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CDK20Q8IZL9 346 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SCAMP4Q969E2 229 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GMEB2Q9UKD1 530 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PLEKHA6Q9Y2H5 1048 aa16.12■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZNF879B4DU55 563 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SSX5O60225 188 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 C8orf89P0DMQ9 161 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR12D1P0DN82 309 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ADH7P40394 386 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CPT1AP50416 773 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 VEZF1Q14119 521 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 HES5Q5TA89 166 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FAM180AQ6UWF9 173 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FRRS1Q6ZNA5 592 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PTOV1Q86YD1 416 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 C9orf62Q8N4C0 152 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 DNAJC5Q9H3Z4 198 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR2S2Q9NQN1 319 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NIT2Q9NQR4 276 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PSMD9O00233 223 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CHP2O43745 196 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MMP2P08253 660 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GABRB1P18505 474 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RPL17P18621 184 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GJA5P36382 358 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CLDN12P56749 244 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CLDN20P56880 219 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 LASP1Q14847 261 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZNF630Q2M218 657 aaPredicted RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MEDAGQ5VYS4 303 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TSPAN33Q86UF1 283 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 HDDC3Q8N4P3 179 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FAM46AQ96IP4 442 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MIXL1Q9H2W2 232 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ASF1BQ9NVP2 202 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 AHSPQ9NZD4 102 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 F8W036 122 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TRIM3O75382 744 aaPredicted RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PRAMEF12O95522 483 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CFDP00746 253 aaPredicted RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 APEHP13798 732 aaKnown RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZNF140P52738 457 aaPredicted RBP16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 BLOC1S1P78537 153 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MPP7Q5T2T1 576 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 AGTRAPQ6RW13 159 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FOXRED2Q8IWF2 684 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ZSCAN1Q8NBB4 408 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CYB561A3Q8NBI2 242 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 POGLUT1Q8NBL1 392 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR52I1Q8NGK6 324 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 OR8D4Q8NGM9 314 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 LHFPL5Q8TAF8 219 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NKD1Q969G9 470 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CRB3Q9BUF7 120 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SLC52A3Q9NQ40 469 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RBPJLQ9UBG7 517 aa16.11■□□□□ 0.17
TRAF3IP1-202ENST00000391993 KANTRA0A1W2PQU2 76 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 F5H0A9 414 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CREBL2O60519 120 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CSNK1DP48730 415 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CRYBB1P53674 252 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TNFRSF17Q02223 184 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CLDN22Q8N7P3 220 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FAM98AQ8NCA5 519 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 HUS1BQ8NHY5 278 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 THAP6Q8TBB0 222 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 C3orf49Q96BT1 292 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PDLIM5Q96HC4 596 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CXorf58Q96LI9 332 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NT5DC2Q9H857 520 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 KCNE1P15382 129 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GIPRP48546 466 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 MYO9BQ13459 2157 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 USF2Q15853 346 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SFRP5Q5T4F7 317 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 GPR150Q8NGU9 434 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PIGXQ8TBF5 258 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PGAP3Q96FM1 320 aaPredicted RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 C16orf70Q9BSU1 422 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 NLGN3Q9NZ94 848 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 IRAK3Q9Y616 596 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 A0A0B4J293 547 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 ADAP00813 363 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 IL3P08700 152 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 RPL4P36578 427 aaKnown RBP16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 CRYBB2P43320 205 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 HTR4Q13639 388 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 PLK5Q496M5 336 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 SCGB2B2Q4G0G5 96 aa16.1■□□□□ 0.17
TRAF3IP1-202ENST00000391993 FAHD1Q6P587 224 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms