RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 UCK2Q9BZX2 261 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 FBRSQ9HAH7 460 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 ISYNA1Q9NPH2 558 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 C1GALT1Q9NS00 363 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 ATP6V1HQ9UI12 483 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 TMCC3Q9ULS5 477 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 SLC6A14Q9UN76 642 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 DIMT1Q9UNQ2 313 aaKnown RBP8.45□□□□□ -1.06
GPNMB-202ENST00000381990 GPSM3Q9Y4H4 160 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 SNX11Q9Y5W9 270 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-202ENST00000381990 BRWD1Q9NSI6 2320 aa8.45□□□□□ -1.06
GPNMB-202ENST00000381990 NUP214P35658 2090 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-202ENST00000381990 GPR89AB7ZAQ6 455 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MSL3P1P0C860 447 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GPR89BP0CG08 455 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 DDX5P17844 614 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CTHP32929 405 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 LTBRP36941 435 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PNLIPRP1P54315 467 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CLDN20P56880 219 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RRAS2P62070 204 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TBPL1P62380 186 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ZNF91Q05481 1191 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 EEF1A2Q05639 463 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 IKZF1Q13422 519 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 LIPKQ5VXJ0 399 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 KIAA1211LQ6NV74 962 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SLCO4C1Q6ZQN7 724 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 FAM83HQ6ZRV2 1179 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PDZD3Q86UT5 571 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TDHQ8IZJ6 230 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 NFKBIDQ8NI38 313 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 DNAJA4Q8WW22 397 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 FAM131CQ96AQ9 280 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CLIP3Q96DZ5 547 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 IL4I1Q96RQ9 567 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MTERF1Q99551 399 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GABRG3Q99928 467 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 LGR4Q9BXB1 951 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ZDHHC5Q9C0B5 715 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TRIM45Q9H8W5 580 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 WDR70Q9NW82 654 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CLEC2DQ9UHP7 191 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 NUP50Q9UKX7 468 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PRKAB1Q9Y478 270 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PCYT1BQ9Y5K3 369 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ALG5Q9Y673 324 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 DOCK9Q9BZ29 2069 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 IRGMA1A4Y4 181 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 C12orf71A8MTZ7 269 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 J3KTA2 159 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CACNB4O00305 520 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CSF2P04141 144 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PSKH1P11801 424 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CKMT1AP12532 417 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CFL1P23528 166 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 POU1F1P28069 291 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TIA1P31483 386 aaKnown RBP eCLIP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TRIM23P36406 574 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 HBA1P69905 142 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RAE1P78406 368 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 HEPACAMQ14CZ8 416 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 IRF4Q15306 451 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 BTBD16Q32M84 506 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PLK5Q496M5 336 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TMEM196Q5HYL7 178 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ZNF730Q6ZMV8 503 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 USP30Q70CQ3 517 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 Q8N402 240 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ATP6V1C2Q8NEY4 427 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GANCQ8TET4 914 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 NEIL2Q969S2 332 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TEFMQ96QE5 360 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 COQ7Q99807 217 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SOSTQ9BQB4 213 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 C1QTNF2Q9BXJ5 285 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 REEP4Q9H6H4 257 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 WDR26Q9H7D7 661 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SGK2Q9HBY8 427 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MBNL1Q9NR56 388 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GSTK1Q9Y2Q3 226 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 DYRK1BQ9Y463 629 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GNG14A0A1W2PPG7 69 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RAB36O95755 333 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GAAP10253 952 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ARAFP10398 606 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 NPPBP16860 134 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MYL12AP19105 171 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 FGF9P31371 208 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 BMP8BP34820 402 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 GSTM5P46439 218 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TAP2Q03519 686 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MXD1Q05195 221 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 MRPL28Q13084 256 aaKnown RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SGCGQ13326 291 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 COX20Q5RI15 118 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms