RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 A4GNTQ9UNA3 340 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 MGAT4BQ9UQ53 548 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC27A6Q9Y2P4 619 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 GRIP1Q9Y3R0 1128 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 LTBP2Q14767 1821 aa15.35■□□□□ 0.05
NKX3-1-201ENST00000380871 SLC31A1O15431 190 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 OR1F1O43749 312 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 DBPQ10586 325 aaPredicted RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 MLLT11Q13015 90 aaPredicted RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 INSL4Q14641 139 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 PROKR2Q8NFJ6 384 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 SNX18Q96RF0 628 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 TMEM245Q9H330 911 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 EGLN3Q9H6Z9 239 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 NDOR1Q9UHB4 597 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 B4DXG7 233 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 DDCP20711 480 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 GDI1P31150 447 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 SOX18P35713 384 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 GINS1Q14691 196 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 PDGFRLQ15198 375 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 PYDC2Q56P42 97 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 IQCHQ86VS3 1027 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 ATP6V1C2Q8NEY4 427 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 OR2L2Q8NH16 312 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 C1GALT1C1Q96EU7 318 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 C12orf66Q96MD2 445 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 QRSL1Q9H0R6 528 aaKnown RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 HCN2Q9UL51 889 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 IQCMA0A1B0GVH7 501 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 OR52A4PA6NMU1 304 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 FAAHO00519 579 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 PI15O43692 258 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 GPC1P35052 558 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 RPL3P39023 403 aaKnown RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 KIR2DL3P43628 341 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 MAP4K2Q12851 820 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 RUNX3Q13761 415 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 C1DQ13901 141 aaKnown RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 VITQ6UXI7 678 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 TMIEQ8NEW7 156 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 OR52P1PQ8NH57 321 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 TM4SF18Q96CE8 201 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 RNF170Q96K19 258 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 ZNF582Q96NG8 517 aaPredicted RBP15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 WDFY2Q96P53 400 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 A4GALTQ9NPC4 353 aa15.34■□□□□ 0.05
NKX3-1-201ENST00000380871 PLA2G10O15496 165 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 PDPK1O15530 556 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 NCR1O76036 304 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 TSPAN19P0C672 248 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 KCNJ5P48544 419 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 PRKAG1P54619 331 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 SCN1BQ07699 218 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 PDZD3Q86UT5 571 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 OR14C36Q8NHC7 312 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC7A6Q92536 515 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF354BQ96LW1 612 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 NDRG2Q9UN36 371 aaKnown RBP15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 GPSM3Q9Y4H4 160 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 STON1Q9Y6Q2 735 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 CCDC182A6NF36 153 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 LINC01565O15544 149 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 TMPRSS11DO60235 418 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC35G4P0C7Q5 338 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 PTNP21246 168 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 APEX1P27695 318 aaKnown RBP15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 CDK3Q00526 305 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 PDZK1Q5T2W1 519 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 UNC5DQ6UXZ4 953 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 LRRTM4Q86VH4 590 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 OR4K5Q8NGD3 323 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 FUZQ9BT04 418 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 OR52A5Q9H2C5 316 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 MAN2C1Q9NTJ4 1040 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 COMMD3Q9UBI1 195 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 REV3LO60673 3130 aa15.33■□□□□ 0.04
NKX3-1-201ENST00000380871 EPPINO95925 133 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 RB1P06400 928 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 ACADLP28330 430 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 TMEM31Q5JXX7 168 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 TRIM69Q86WT6 500 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 HERVK_113Q902F9 699 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 MTERF3Q96E29 417 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 KATNB1Q9BVA0 655 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC22A4Q9H015 551 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 LHX9Q9NQ69 397 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 FBXW2Q9UKT8 454 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 ICKQ9UPZ9 632 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 CXorf51AA0A1B0GTR3 108 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 SLC35F4A4IF30 521 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 HMX3A6NHT5 357 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 FRS3O43559 492 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 MYL9P24844 172 aa15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 CRTC2Q53ET0 693 aaPredicted RBP15.32■□□□□ 0.04
NKX3-1-201ENST00000380871 ZNF438Q7Z4V0 828 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms