RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 FTSJ1Q9UET6 329 aa18.05■□□□□ 0.48
GMDS-201ENST00000380805 SLC9A8Q9Y2E8 581 aa18.05■□□□□ 0.48
GMDS-201ENST00000380805 KCNE3Q9Y6H6 103 aa18.05■□□□□ 0.48
GMDS-201ENST00000380805 CEP192Q8TEP8 1941 aa18.05■□□□□ 0.48
GMDS-201ENST00000380805 CYR61O00622 381 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 DNAJB6O75190 326 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 ATP1B1P05026 303 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 RACK1P63244 317 aaKnown RBP18.04■□□□□ 0.48
GMDS-201ENST00000380805 DYNC1I2Q13409 638 aaKnown RBP18.04■□□□□ 0.48
GMDS-201ENST00000380805 FHL5Q5TD97 284 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 RBM45Q8IUH3 476 aaKnown RBP18.04■□□□□ 0.48
GMDS-201ENST00000380805 DEPDC4Q8N2C3 294 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 KAT2AQ92830 837 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 YIPF4Q9BSR8 244 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 RHCGQ9UBD6 479 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 TMCC3Q9ULS5 477 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 MGAT4BQ9UQ53 548 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 PCDHGA10Q9Y5H3 936 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 SPACA6W5XKT8 324 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 CACNA1IQ9P0X4 2223 aa18.04■□□□□ 0.48
GMDS-201ENST00000380805 A0A087WV62 115 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 LILRA5A6NI73 299 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ZAR1LA6NP61 321 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 B4DGG1 531 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 PDGFBP01127 241 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 GASTP01350 101 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 PORP16435 677 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 SIM1P81133 766 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 MVKQ03426 396 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 UBXN2BQ14CS0 331 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 FAM214AQ32MH5 1076 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ARMC6Q6NXE6 501 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 KLHL35Q6PF15 583 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 KLHL17Q6TDP4 642 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 CA13Q8N1Q1 262 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 FAR1Q8WVX9 515 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 NR4A3Q92570 626 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 SHDQ96IW2 340 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ARHGDIGQ99819 225 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 DGCR6LQ9BY27 220 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 FOXQ1Q9C009 403 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 TECTAO75443 2155 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 PTGES3LE9PB15 166 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ST6GAL1P15907 406 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 EMX1Q04741 257 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 PIGFQ07326 219 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 SEC23BQ15437 767 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 NPTX1Q15818 432 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 GPAT3Q53EU6 434 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 DCST1Q5T197 706 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ATAD3BQ5T9A4 648 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 DHRS4L2Q6PKH6 230 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 DEF8Q6ZN54 512 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 Q6ZPB1 254 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 PRSS48Q7RTY5 328 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 PRSS41Q7RTY9 318 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ZNF438Q7Z4V0 828 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ZNF761Q86XN6 746 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 GKN2Q86XP6 184 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 LINC00471Q8N535 108 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 C19orf47Q8N9M1 422 aaKnown RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 VANGL1Q8TAA9 524 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 FAM81AQ8TBF8 368 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 TANKQ92844 425 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 UBE2FQ969M7 185 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 OTUB1Q96FW1 271 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 PRRC1Q96M27 445 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 SLC24A3Q9HC58 644 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 FAM60AQ9NP50 221 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 TIMMDC1Q9NPL8 285 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 FKBP14Q9NWM8 211 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 ERVK-18Q9QC07 812 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 AASSQ9UDR5 926 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 NDOR1Q9UHB4 597 aa18.03■□□□□ 0.48
GMDS-201ENST00000380805 C19orf53Q9UNZ5 99 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 TP53BP1Q12888 1972 aaPredicted RBP18.03■□□□□ 0.48
GMDS-201ENST00000380805 SH3PXD2BA1X283 911 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 FAM170BA6NMN3 283 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 TLR4O00206 839 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 PRKAR1BP31321 381 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 CAPZBP47756 277 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 SIGLEC14Q08ET2 396 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 SMN1Q16637 294 aaKnown RBP18.02■□□□□ 0.48
GMDS-201ENST00000380805 SDR16C5Q8N3Y7 309 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ARL14Q8N4G2 192 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ZNF675Q8TD23 568 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ADAMTS15Q8TE58 950 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 RAB2BQ8WUD1 216 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 FKBP10Q96AY3 582 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 SLC35A4Q96G79 324 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ANKRA2Q9H9E1 313 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 TBC1D17Q9HA65 648 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 RASSF1Q9NS23 344 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 MAN2C1Q9NTJ4 1040 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ZNF226Q9NYT6 803 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 REV1Q9UBZ9 1251 aa18.02■□□□□ 0.48
GMDS-201ENST00000380805 ZNF99A8MXY4 864 aaPredicted RBP18.01■□□□□ 0.47
GMDS-201ENST00000380805 M0R3H8 397 aa18.01■□□□□ 0.47
GMDS-201ENST00000380805 HCRTR1O43613 425 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms