RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ETV5P41161 510 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 ETV1P50549 477 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 RAB25P57735 213 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 SEC23BQ15437 767 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 STK11Q15831 433 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 ZBTB37Q5TC79 503 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 UNC5DQ6UXZ4 953 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 ANKRD33Q7Z3H0 272 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 PDXPQ96GD0 296 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 NRTNQ99748 197 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 MED18Q9BUE0 208 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 HCN2Q9UL51 889 aa15.69■□□□□ 0.1
PCDHA1-201ENST00000378133 SNTNA6NMZ2 147 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 C5orf58C9J3I9 102 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 LRRTM2O43300 516 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 OR10H3O60404 316 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 HPGDSO60760 199 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 LILRB5O75023 590 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 SOD1P00441 154 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 RPS25P62851 125 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 PLK5Q496M5 336 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 FLYWCH1Q4VC44 716 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 LRRC20Q8TCA0 184 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 AKAP1Q92667 903 aaKnown RBP eCLIP15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 TM9SF2Q99805 663 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 B3GAT2Q9NPZ5 323 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 SLAMF7Q9NQ25 335 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 TVP23BQ9NYZ1 205 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 C5AR2Q9P296 337 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 NDOR1Q9UHB4 597 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 H3BUI4 141 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 TLX2O43763 284 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 SCO1O75880 301 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 PDGFAP04085 211 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 C12orf73Q69YU5 71 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 RBM45Q8IUH3 476 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 C9orf62Q8N4C0 152 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 GPR32P1Q8NGA4 272 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 OR4M2Q8NGB6 313 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 OR52I1Q8NGK6 324 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 MARVELD3Q96A59 401 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 KCND3Q9UK17 655 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 NUP50Q9UKX7 468 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 GSTK1Q9Y2Q3 226 aa15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 MTCL1Q9Y4B5 1905 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-201ENST00000378133 INMT-MINDY4F8WBC2 141 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SLC30A4O14863 429 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SH3BP5O60239 455 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 PLOD3O60568 738 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 RAB36O95755 333 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 MANFP55145 182 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 PXDC1Q5TGL8 231 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 FAM205BPQ63HN1 556 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TCTN3Q6NUS6 607 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 FAM92BQ6ZTR7 304 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SLC9B2Q86UD5 537 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 ZNF547Q8IVP9 402 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 FBXL6Q8N531 539 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 CELF5Q8N6W0 485 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 APOBEC4Q8WW27 367 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 GIMAP1Q8WWP7 306 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 DTD2Q96FN9 168 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TMEM19Q96HH6 336 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SOSTQ9BQB4 213 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 WFDC6Q9BQY6 131 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 POLR2J3Q9H1A7 115 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 UCKL1Q9NWZ5 548 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 EIF3KQ9UBQ5 218 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 DIMT1Q9UNQ2 313 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 PRKAB1Q9Y478 270 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 CASKO14936 926 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 RFPL3O75679 317 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 POP7O75817 140 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 PRKACAP17612 351 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 OPRD1P41143 372 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 WDR5P61964 334 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 ANGPT1Q15389 498 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SF3A2Q15428 464 aaKnown RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 CCDC85BQ15834 202 aaPredicted RBP15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 OCLNQ16625 522 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 RAET1GQ6H3X3 334 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TMEM163Q8TC26 289 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TM9SF4Q92544 642 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TMEM43Q9BTV4 400 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 EPHX3Q9H6B9 360 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 MGAT4BQ9UQ53 548 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 CKAP5Q14008 2032 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 ISM1B1AKI9 464 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 PLPP1O14494 284 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 FABP7O15540 132 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 MOSPD3O75425 235 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 SLC22A5O76082 557 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 TNNI3P19429 210 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 DGKGP49619 791 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 DCST1Q5T197 706 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 CCNJQ5T5M9 372 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 OR2G6Q5TZ20 316 aa15.67■□□□□ 0.1
PCDHA1-201ENST00000378133 DEF8Q6ZN54 512 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms