RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZFP41Q8N8Y5 198 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF527Q8NB42 609 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 FIBINQ8TAL6 211 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 STOML3Q8TAV4 291 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 HAVCR2Q8TDQ0 301 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ISG20Q96AZ6 181 aaKnown RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 PITX2Q99697 317 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 CDCA4Q9BXL8 241 aa8.33□□□□□ -1.08
PCDH9-202ENST00000377865 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.33□□□□□ -1.08
PCDH9-202ENST00000377865 MEIS3P2A8K0S8 358 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 A8MVJ9 347 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 DNAJB6O75190 326 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 FPGSQ05932 587 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 FAM214AQ32MH5 1076 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 HAGHLQ6PII5 290 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 KREMEN2Q8NCW0 462 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 OR5W2Q8NH69 310 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CHTF18Q8WVB6 975 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SORCS1Q8WY21 1168 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 POLDIP3Q9BY77 421 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ADAP2Q9NPF8 381 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 TXNL4BQ9NX01 149 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 NDOR1Q9UHB4 597 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 PLAGL1Q9UM63 463 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 PRKAB1Q9Y478 270 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C2orf92A0A1B0GVN3 265 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 RPS26P62854 115 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 E2F1Q01094 437 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF550Q7Z398 422 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ATCAYQ86WG3 371 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CMTM8Q8IZV2 173 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 OR5H6Q8NGV6 325 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SPRYD4Q8WW59 207 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SLC7A6Q92536 515 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SLC41A3Q96GZ6 507 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 COQ10AQ96MF6 247 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF559Q9BR84 538 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ALG8Q9BVK2 526 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ZDHHC4Q9NPG8 344 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 A0A1W2PRU2 124 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C5orf51A6NDU8 294 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 M0R129 80 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 PCDHGA12O60330 932 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GALTP07902 379 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CTNNB1P35222 781 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SLC25A24Q6NUK1 477 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 KIAA1211LQ6NV74 962 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 APCDD1Q8J025 514 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GALNT11Q8NCW6 608 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 LMLNQ96KR4 655 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 KXD1Q9BQD3 176 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CPEB1Q9BZB8 566 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF436Q9C0F3 470 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CST11Q9H112 138 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 B3GNT2Q9NY97 397 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 FBXO10Q9UK96 956 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 NAALAD2Q9Y3Q0 740 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ADAMTSL1Q8N6G6 1762 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SLC35F4A4IF30 521 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 STK25O00506 426 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 MRPL3P09001 348 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 BTG1P62324 171 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 OCLNQ16625 522 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF791Q3KP31 576 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 NADSYN1Q6IA69 706 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C8orf82Q6P1X6 216 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 FAM180AQ6UWF9 173 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 Q8N9G6 341 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C17orf62Q9BQA9 187 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 NTN4Q9HB63 628 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 NPIPB15A6NHN6 443 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 LEFTY1O75610 366 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 PPM1BO75688 479 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GJB3O75712 270 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GATBO75879 557 aaKnown RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GASTP01350 101 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C1QBP02746 253 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ADH5P11766 374 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GNSP15586 552 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 HOXD9P28356 352 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CCR7P32248 378 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CLCNKAP51800 687 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 OR12D2P58182 307 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 MAPK14Q16539 360 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 FAHD1Q6P587 224 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 GDPD3Q7L5L3 318 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 CYB5D2Q8WUJ1 264 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 C11orf54Q9H0W9 315 aaPredicted RBP8.32□□□□□ -1.08
PCDH9-202ENST00000377865 A4GALTQ9NPC4 353 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 SOHLH2Q9NX45 425 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ABRACLQ9P1F3 81 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 PCDH10Q9P2E7 1040 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 N6AMT1Q9Y5N5 214 aa8.32□□□□□ -1.08
PCDH9-202ENST00000377865 ARRDC5A6NEK1 342 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 RLN2P04090 185 aa8.31□□□□□ -1.08
PCDH9-202ENST00000377865 HTR2AP28223 471 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms