RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 C3P1Q6ZMU1 363 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 TRILQ7L0X0 811 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 PRR22Q8IZ63 422 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 OR9A2Q8NGT5 310 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 SPPL2AQ8TCT8 520 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 TCP10LQ8TDR4 215 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 LCORQ96JN0 433 aaPredicted RBP15.46■□□□□ 0.07
HMGN4-201ENST00000377575 JSRP1Q96MG2 331 aaPredicted RBP15.46■□□□□ 0.07
HMGN4-201ENST00000377575 BBS4Q96RK4 519 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 TMEM109Q9BVC6 243 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 PARD6BQ9BYG5 372 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 LDAHQ9H6V9 325 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 QPCTLQ9NXS2 382 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 SLC17A7Q9P2U7 560 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 FIS1Q9Y3D6 152 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 LIPGQ9Y5X9 500 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 CENPEQ02224 2701 aa15.46■□□□□ 0.07
HMGN4-201ENST00000377575 A0A1B0GVC2 190 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 FRG2CA6NGY1 282 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 LRRC3CA6NJW4 275 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 NPIPB8E9PQR5 432 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 AQP7O14520 342 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 BCKDKO14874 412 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 SUSD5O60279 629 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 SEC22BO75396 215 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 PPM1BO75688 479 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 SLITRK5O94991 958 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 SNX4O95219 450 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 NAGAP17050 411 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 NTSP30990 170 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 MAN2A2P49641 1150 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 PSPHP78330 225 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 PLCXD2Q0VAA5 305 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 KRT71Q3SY84 523 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 KANK2Q63ZY3 851 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM198Q66K66 360 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 FAM71E1Q6IPT2 247 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 NOXRED1Q6NXP6 359 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 TICAM1Q8IUC6 712 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 RILPQ96NA2 401 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 DMRTA2Q96SC8 542 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 MECRQ9BV79 373 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 STMN4Q9H169 189 aaPredicted RBP15.45■□□□□ 0.06
HMGN4-201ENST00000377575 EXO5Q9H790 373 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 LRTM1Q9HBL6 345 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 PROK2Q9HC23 129 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 C1orf109Q9NX04 203 aa15.45■□□□□ 0.06
HMGN4-201ENST00000377575 FIGNL2A6NMB9 653 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 NPIPA2E9PIF3 369 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 NPIPA3F8WFD2 350 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 HCN1O60741 890 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 TRIM3O75382 744 aaPredicted RBP15.44■□□□□ 0.06
HMGN4-201ENST00000377575 TUBBP07437 444 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 DRD5P21918 477 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 SERPINB5P36952 375 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 PPICP45877 212 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 MASP1P48740 699 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 EMDP50402 254 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM211Q6ICI0 200 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 PACS2Q86VP3 889 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.44■□□□□ 0.064e-11■■■■■ 41.4
HMGN4-201ENST00000377575 KAT2AQ92830 837 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 SARAFQ96BY9 339 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 OMA1Q96E52 524 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 BTBD9Q96Q07 612 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 METTL7AQ9H8H3 244 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 CHST11Q9NPF2 352 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 COQ3Q9NZJ6 369 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 RAB21Q9UL25 225 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 CCL27Q9Y4X3 112 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 PTGDR2Q9Y5Y4 395 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 FREM3P0C091 2139 aa15.44■□□□□ 0.06
HMGN4-201ENST00000377575 TRGV5A0A0B4J1U4 118 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 MYO1GB0I1T2 1018 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 ADAM10O14672 748 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 TO15178 435 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 RGS16O15492 202 aaPredicted RBP15.43■□□□□ 0.06
HMGN4-201ENST00000377575 PLOD3O60568 738 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 COQ9O75208 318 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 CLDN14O95500 239 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 CHRNGP07510 517 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 ABCB1P08183 1280 aaPredicted RBP15.43■□□□□ 0.06
HMGN4-201ENST00000377575 CELA3AP09093 270 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 GDF1P27539 372 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 HTR1EP28566 365 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 SOX18P35713 384 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 NCBP2P52298 156 aaKnown RBP eCLIP15.43■□□□□ 0.06
HMGN4-201ENST00000377575 ZNF844Q08AG5 666 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 ZNF630Q2M218 657 aaPredicted RBP15.43■□□□□ 0.06
HMGN4-201ENST00000377575 TMEM81Q6P7N7 255 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 NCCRP1Q6ZVX7 275 aaPredicted RBP15.43■□□□□ 0.06
HMGN4-201ENST00000377575 NUP54Q7Z3B4 507 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 DDIASQ8IXT1 998 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 LIX1Q8N485 282 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 SIMC1Q8NDZ2 872 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 TWIST2Q8WVJ9 160 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 CCT7Q99832 543 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 ANGPTL4Q9BY76 406 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 TAS2R9Q9NYW1 312 aa15.43■□□□□ 0.06
HMGN4-201ENST00000377575 TAS2R7Q9NYW3 318 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms