RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 TGM4P49221 684 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 TAS2R38P59533 333 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PRDX1Q06830 199 aaKnown RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 MLF2Q15773 248 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 USP30Q70CQ3 517 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OR8H2Q8N162 312 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SIX5Q8N196 739 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 TTLQ8NG68 377 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OR9Q1Q8NGQ5 310 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OR2A1Q8NGT9 310 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 XAGE5Q8WWM1 108 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ING5Q8WYH8 240 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ST6GAL2Q96JF0 529 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SNX18Q96RF0 628 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 GDF15Q99988 308 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PLA2G12AQ9BZM1 189 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 OR2B2Q9GZK3 357 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 MKI67P46013 3256 aaKnown RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 PRICKLE3O43900 615 aaPredicted RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 CDRT1O95170 752 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 SLC9A3P48764 834 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 GPR19Q15760 415 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF628Q5EBL2 1059 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 QSOX2Q6ZRP7 698 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 MMAAQ8IVH4 418 aaKnown RBP10.05□□□□□ -0.8
ABCF1-202ENST00000376545 MOAP1Q96BY2 351 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 KCNK12Q9HB15 430 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 ACSL5Q9ULC5 683 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
ABCF1-202ENST00000376545 C4orf51C9J302 202 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 PPM1DO15297 605 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 FGBP02675 491 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 NAT2P11245 290 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 TEAD1P28347 426 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 NKX2-5P52952 324 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 RUNX1T1Q06455 604 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ACSM1Q08AH1 577 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 GNA13Q14344 377 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 MINDY4Q4G0A6 757 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ATAT1Q5SQI0 421 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 PPP2R2DQ66LE6 453 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 RDH10Q8IZV5 341 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 POF1BQ8WVV4 589 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ARHGAP9Q9BRR9 750 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF649Q9BS31 505 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 TP63Q9H3D4 680 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ANKRD19PQ9H560 264 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ABCB9Q9NP78 766 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 POLMQ9NP87 494 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 PRDM7Q9NQW5 492 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ZCCHC3Q9NUD5 404 aaKnown RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF221Q9UK13 617 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 LIPT1Q9Y234 373 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 CHST2Q9Y4C5 530 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 A0A087WUU8 490 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 WASHC1A8K0Z3 465 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 AP3D1O14617 1153 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 HLA-DQB1P01920 261 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 S100A1P23297 94 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 RCVRNP35243 200 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 TSPAN31Q12999 210 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 CAMK1Q14012 370 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 WSCD2Q2TBF2 565 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 WASH2PQ6VEQ5 465 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 SLC36A4Q6YBV0 504 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF517Q6ZMY9 492 aaPredicted RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 RASSF6Q6ZTQ3 369 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 OR8D4Q8NGM9 314 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 GNPDA2Q8TDQ7 276 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 SAP130Q9H0E3 1048 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 KLHL31Q9H511 634 aa10.04□□□□□ -0.8
ABCF1-202ENST00000376545 EXOSC1Q9Y3B2 195 aaKnown RBP10.04□□□□□ -0.8
ABCF1-202ENST00000376545 A0A1W2PQ09 198 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 FAM47E-STBD1D6RA91 191 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 RGS5O15539 181 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 SH3BP5O60239 455 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 CSF3P09919 207 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 LIMS3P0CW19 117 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 LIMS4P0CW20 117 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 TRIM23P36406 574 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 OMPP47874 163 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 NCBP2P52298 156 aaKnown RBP eCLIP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 DUSP2Q05923 314 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 OLIG3Q7RTU3 272 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 RAB43Q86YS6 212 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 POGLUT1Q8NBL1 392 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 DIO2Q92813 273 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 MS4A6EQ96DS6 147 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 CNRIP1Q96F85 164 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 CAMK1GQ96NX5 476 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 INSM2Q96T92 566 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 KATNB1Q9BVA0 655 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 FAIM2Q9BWQ8 316 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 JAM3Q9BX67 310 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 PRSS16Q9NQE7 514 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms