RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 SEC14L5O43304 696 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 ZIC3O60481 467 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 ABCB1P08183 1280 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-204ENST00000373560 MGAT1P26572 445 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 CLDN20P56880 219 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 PCDH1Q08174 1060 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 LGALS3BPQ08380 585 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 SPOCK1Q08629 439 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 SETDB1Q15047 1291 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 LYPD4Q6UWN0 246 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 SDCCAG8Q86SQ7 713 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-204ENST00000373560 TAGAPQ8N103 731 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 SLC35B2Q8TB61 432 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 ALG3Q92685 438 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 BTBD9Q96Q07 612 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 CHP1Q99653 195 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 FOLH1BQ9HBA9 442 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 PLSCR4Q9NRQ2 329 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 WHRNQ9P202 907 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 KLHL42Q9P2K6 505 aa10.89□□□□□ -0.67
HDAC8-204ENST00000373560 TMEFF2Q9UIK5 374 aaPredicted RBP10.89□□□□□ -0.67
HDAC8-204ENST00000373560 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.89□□□□□ -0.67
HDAC8-204ENST00000373560 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 C2orf92A0A1B0GVN3 265 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SLCO1B7G3V0H7 640 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 GUCA1CO95843 209 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 C8GP07360 202 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ARAFP10398 606 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 PSMB1P20618 241 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ZFP36P26651 326 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ABCD3P28288 659 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SRD5A2P31213 254 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 RPS13P62277 151 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 KIF5AQ12840 1032 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SLBPQ14493 270 aaKnown RBP eCLIP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 RAB35Q15286 201 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 OR5M10Q6IEU7 315 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 AAGABQ6PD74 315 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 B3GLCTQ6Y288 498 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 THOC6Q86W42 341 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 OR5M1Q8NGP8 315 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 OR6K3Q8NGY3 331 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ADIPOR1Q96A54 375 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 RHBDF1Q96CC6 855 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 F2RL3Q96RI0 385 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 TCF12Q99081 682 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 PKP2Q99959 881 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SORBS1Q9BX66 1292 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 REXO4Q9GZR2 422 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 PCNX3Q9H6A9 2034 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 COPS7BQ9H9Q2 264 aaPredicted RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 SNX15Q9NRS6 342 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ARL15Q9NXU5 204 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 PTBP2Q9UKA9 531 aaKnown RBP10.88□□□□□ -0.67
HDAC8-204ENST00000373560 EFR3BQ9Y2G0 817 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 GPR52Q9Y2T5 361 aa10.88□□□□□ -0.67
HDAC8-204ENST00000373560 ESYT3A0FGR9 886 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 PABPN1LA6NDY0 278 aaKnown RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 E7EQL1 145 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 AKR1B10O60218 316 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 GCM2O75603 506 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 CBR3O75828 277 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 APRTP07741 180 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 CT62P0C5K7 136 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 RHOXF2BP0C7M4 288 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 COL6A2P12110 1019 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 ALOX15P16050 662 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 CTNNA1P35221 906 aaKnown RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 SP140Q13342 867 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 OCLNQ16625 522 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 SPRED3Q2MJR0 410 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 AGAP6Q5VW22 663 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 C18orf63Q68DL7 685 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF470Q6ECI4 717 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 CHMP1BQ7LBR1 199 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 BBOF1Q8ND07 529 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 FBXL8Q96CD0 374 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 HBEGFQ99075 208 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 NDNQ99608 321 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 NXF5Q9H1B4 397 aaKnown RBP10.87□□□□□ -0.67
HDAC8-204ENST00000373560 C12orf49Q9H741 205 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 LYRM4Q9HD34 91 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 BRD7Q9NPI1 651 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 CBLN4Q9NTU7 201 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 NPAP1Q9NZP6 1156 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 KLRF1Q9NZS2 232 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 DKKL1Q9UK85 242 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 SLC22A14Q9Y267 594 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 SPACA6W5XKT8 324 aa10.87□□□□□ -0.67
HDAC8-204ENST00000373560 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 GOLGA6L9A6NEM1 432 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 E7EVH7 732 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 H7C417 338 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 LINC01387J3KSC0 135 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms