RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ELOAQ14241 798 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PTGR1Q14914 329 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 SEC23BQ15437 767 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 RANBP3Q9H6Z4 567 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 IFNA21P01568 189 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 NUDT1P36639 197 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 STT3AP46977 705 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR12D2P58182 307 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 TAGLNQ01995 201 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PIGGQ5H8A4 983 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PNPLA2Q96AD5 504 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC7A6OSQ96CW6 309 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 TAS2R9Q9NYW1 312 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ANKRD36CQ5JPF3 1778 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 LRRN3E7EW58 273 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 BOLA2-SMG1P6H3BVE0 249 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 SDHDO14521 159 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 TP53I11O14683 189 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 CDC123O75794 336 aaPredicted RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PTBP3O95758 552 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PROS1P07225 676 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 FGL1Q08830 312 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 RAB6CQ53S08 254 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 HACD2Q6Y1H2 254 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ADAD1Q96M93 576 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 RAB6CQ9H0N0 254 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 LRRN3Q9H3W5 708 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 TOGARAM1Q9Y4F4 1720 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 E7ESA3 106 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 CYB5AP00167 134 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 MAP2K4P45985 399 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 UBE2KP61086 200 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCGB2B2Q4G0G5 96 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 FAM78AQ5JUQ0 283 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 KDELC1Q6UW63 502 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR4C5Q8NGB2 326 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 S100A16Q96FQ6 103 aaKnown RBP12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 DPH7Q9BTV6 452 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 HEBP1Q9NRV9 189 aa12.7□□□□□ -0.38
RAPGEF1-201ENST00000372189 VSTM5A8MXK1 200 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 RP2O75695 350 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 OXSR1O95747 527 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC16A8O95907 504 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PRKCDQ05655 676 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 COL19A1Q14993 1142 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 RPS27LQ71UM5 84 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CNIH3Q8TBE1 160 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 TOE1Q96GM8 510 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 DNAJC27Q9NZQ0 273 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 TEX51A0A1B0GUA7 166 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 MYOCOSA0A1B0GUC4 107 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CLEC3AO75596 197 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 EIF2B1Q14232 305 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PPP1R3AQ16821 1122 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PAN3Q58A45 887 aaKnown RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF529Q6P280 563 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ALKAL1Q6UXT8 129 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 Q6ZSR6 202 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 VN1R2Q8NFZ6 395 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ITPKCQ96DU7 683 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF382Q96SR6 550 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 NOX1Q9Y5S8 564 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PRSS51A0A1B0GVH4 220 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 DPP6P42658 865 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 PCP4P48539 62 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR10Q1Q8NGQ4 319 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 GNPDA2Q8TDQ7 276 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 TSSK6Q9BXA6 273 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 MTG2Q9H4K7 406 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 ACSL6Q9UKU0 697 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 KIAA0355O15063 1070 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CSF2P04141 144 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CYP17A1P05093 508 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CHRNB1P11230 501 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR4D2P58180 307 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 METTL25Q8N6Q8 603 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 DEFB126Q9BYW3 111 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 CDH10Q9Y6N8 788 aa12.69□□□□□ -0.38
RAPGEF1-201ENST00000372189 DRGXA6NNA5 263 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC34A2O95436 690 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 HBQ1P09105 142 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF81P51508 661 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ARFRP1Q13795 201 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 NR0B2Q15466 257 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms