RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 OXSR1O95747 527 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 CYP4B1P13584 511 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 CCNA2P20248 432 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 CD247P20963 164 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PCMT1P22061 227 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 CLDN2P57739 230 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 RGS1Q08116 209 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 EXOC3L2Q2M3D2 409 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 MLIPQ5VWP3 458 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ACOT4Q8N9L9 421 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 OR4C6Q8NH72 309 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PHF10Q8WUB8 498 aaKnown RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 SLC38A5Q8WUX1 472 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 APOBEC4Q8WW27 367 aaKnown RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 FCGR1BQ92637 280 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 FEVQ99581 238 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 MAPKAP1Q9BPZ7 522 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 AICDAQ9GZX7 198 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 LHPPQ9H008 270 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 GLIPR2Q9H4G4 154 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 TBC1D29Q9UFV1 150 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 HS3ST3A1Q9Y663 406 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 DGKBQ9Y6T7 804 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ZNF99A8MXY4 864 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 HMGN4O00479 90 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ZW10O43264 779 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 RGS10O43665 173 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PIAS2O75928 621 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 MFN2O95140 757 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ALPPL2P10696 532 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 F3P13726 295 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 NCBP2P52298 156 aaKnown RBP eCLIP13.24□□□□□ -0.29
LDB3-204ENST00000372066 CASP9P55211 416 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 RELAQ04206 551 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 TP53BP2Q13625 1128 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 CEBPEQ15744 281 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 COLEC12Q5KU26 742 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 SLC48A1Q6P1K1 146 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 Q6ZSR6 202 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PRSS48Q7RTY5 328 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 P3H2Q8IVL5 708 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 SAMD14Q8IZD0 417 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 ZNF354BQ96LW1 612 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ABCG4Q9H172 646 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 SRMSQ9H3Y6 488 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 ZCCHC3Q9NUD5 404 aaKnown RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 ACER3Q9NUN7 267 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 SPHK1Q9NYA1 384 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 PSME2Q9UL46 239 aa13.24□□□□□ -0.29
LDB3-204ENST00000372066 GPC6Q9Y625 555 aaPredicted RBP13.24□□□□□ -0.29
LDB3-204ENST00000372066 A6NCN8 305 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 URADA6NGE7 173 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 PRAMEF25A6NGN4 478 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 ATXN7O15265 892 aaPredicted RBP13.23□□□□□ -0.29
LDB3-204ENST00000372066 MPZL2O60487 215 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 FAM20BO75063 409 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 FHP07954 510 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 CKMT1AP12532 417 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 MYF5P13349 255 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 CSNK2A2P19784 350 aaPredicted RBP13.23□□□□□ -0.29
LDB3-204ENST00000372066 CBLP22681 906 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 ACTR1BP42025 376 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 OR1E2P47887 323 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 KCNJ5P48544 419 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 CRISP3P54108 245 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 ACTR1AP61163 376 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 PRR5P85299 388 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 DCTN2Q13561 401 aaKnown RBP13.23□□□□□ -0.29
LDB3-204ENST00000372066 ZNF542PQ5EBM4 170 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 ANKRD13BQ86YJ7 626 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 LINC00471Q8N535 108 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 NR4A3Q92570 626 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 RORBQ92753 470 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 BMFQ96LC9 184 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 DHRS1Q96LJ7 313 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 PAK1IP1Q9NWT1 392 aaPredicted RBP13.23□□□□□ -0.29
LDB3-204ENST00000372066 PHF11Q9UIL8 331 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 SH3GLB1Q9Y371 365 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 PCDHGA6Q9Y5G7 932 aa13.23□□□□□ -0.29
LDB3-204ENST00000372066 OR2A25A4D2G3 310 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 PTGES3LE9PB15 166 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ASNA1O43681 348 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 SLC28A2O43868 658 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ATE1O95260 518 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ADAP00813 363 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 SLC35G6P0C7Q6 338 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 TNFRSF1BP20333 461 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 ZNF10P21506 573 aaPredicted RBP13.22□□□□□ -0.29
LDB3-204ENST00000372066 MATN1P21941 496 aa13.22□□□□□ -0.29
LDB3-204ENST00000372066 FMO3P31513 532 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms