RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 ELP4Q96EB1 424 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 TRNT1Q96Q11 434 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 MACROD1Q9BQ69 325 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 RACGAP1Q9H0H5 632 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 TRIM45Q9H8W5 580 aaPredicted RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 SLC25A19Q9HC21 320 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 DNAAF2Q9NVR5 837 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 ZNF624Q9P2J8 865 aaPredicted RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 PHF11Q9UIL8 331 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 SPTBN5Q9NRC6 3674 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 GSAPA4D1B5 854 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 LRRC72A6NJI9 287 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 AGR2O95994 175 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 PDGFBP01127 241 aaPredicted RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 SLC35G6P0C7Q6 338 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 ADORA3P0DMS8 318 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 GSTM3P21266 225 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 POU1F1P28069 291 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 NUDT6P53370 316 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 NCS1P62166 190 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 BTN3A2P78410 334 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.38□□□□□ -0.43
ECM1-202ENST00000369047 TARDBPQ13148 414 aaKnown RBP eCLIP12.38□□□□□ -0.43
ECM1-202ENST00000369047 LASP1Q14847 261 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 NCF4Q15080 339 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 SYT16Q17RD7 645 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 RGS21Q2M5E4 152 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 ATAD3BQ5T9A4 648 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 USP43Q70EL4 1123 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 RBM45Q8IUH3 476 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 NUP43Q8NFH3 380 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 TM4SF19Q96DZ7 209 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 MRGPRX1Q96LB2 322 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 BMFQ96LC9 184 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 PRRC1Q96M27 445 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 MMP27Q9H306 513 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 TRNAU1APQ9NX07 287 aaKnown RBP12.38□□□□□ -0.43
ECM1-202ENST00000369047 NTMQ9P121 344 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 CORINQ9Y5Q5 1042 aa12.38□□□□□ -0.43
ECM1-202ENST00000369047 COL6A3P12111 3177 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 hCG_2014768A0A024R1R8 64 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 J3QRK9 145 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 NME6O75414 186 aaPredicted RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 PRKRAO75569 313 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 SULT1C4O75897 302 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 CHRM4P08173 479 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 NR2F6P10588 404 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 ZNF10P21506 573 aaPredicted RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 AVPR2P30518 371 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 FEN1P39748 380 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 CLDN2P57739 230 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 PIN1Q13526 163 aaPredicted RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 SUZ12Q15022 739 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 OCLNQ16625 522 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 TIMM50Q3ZCQ8 353 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 SLC25A30Q5SVS4 291 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 RNLSQ5VYX0 342 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 FBXO42Q6P3S6 717 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 TMEM107Q6UX40 140 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 DCDC5Q6ZRR9 648 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 VN1R4Q7Z5H5 301 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 IGFN1Q86VF2 1251 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 OR7D2Q96RA2 312 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 SERINC2Q96SA4 455 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 ACTRT3Q9BYD9 372 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 SELENONQ9NZV5 590 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 RPL36Q9Y3U8 105 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 HS3ST3A1Q9Y663 406 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 MDC1Q14676 2089 aaKnown RBP12.37□□□□□ -0.43
ECM1-202ENST00000369047 TECTAO75443 2155 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 NINQ8N4C6 2090 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 ATG2BQ96BY7 2078 aa12.37□□□□□ -0.43
ECM1-202ENST00000369047 FAM86C2PA6NEL3 165 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 H3BN98 237 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 BTN3A3O00478 584 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 STATHP02808 62 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 SMIM10L1P0DMW3 83 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
ECM1-202ENST00000369047 TLX1P31314 330 aaPredicted RBP12.36□□□□□ -0.43
ECM1-202ENST00000369047 IFNA8P32881 189 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 IFNGR2P38484 337 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 ACTR1BP42025 376 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 MAN2A2P49641 1150 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 RGS6P49758 472 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 ACTR1AP61163 376 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 FUT5Q11128 374 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 ITGADQ13349 1161 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 ARMCX4Q5H9R4 360 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 C1orf94Q6P1W5 598 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 PODNL1Q6PEZ8 512 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 RD3Q7Z3Z2 195 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 LACC1Q8IV20 430 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
ECM1-202ENST00000369047 KBTBD8Q8NFY9 601 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms