RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CDRT1O95170 752 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SERPIND1P05546 499 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GSTT2P0CG29 244 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GSTT2BP0CG30 244 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 CSNK2A2P19784 350 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 HIST1H1TP22492 207 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 IFNA8P32881 189 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ETV5P41161 510 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 BUD31P41223 144 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 RPS5P46782 204 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 SLC9A3P48764 834 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ETV1P50549 477 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GAS1P54826 345 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 PRR5P85299 388 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SCN1BQ07699 218 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 FUT5Q11128 374 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 TSPAN31Q12999 210 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ASAH1Q13510 395 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 TRAM2Q15035 370 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ATAT1Q5SQI0 421 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 RASSF6Q6ZTQ3 369 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 BCDIN3DQ7Z5W3 292 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 GDPD1Q8N9F7 314 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SRFBP1Q8NEF9 429 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 AP3S1Q92572 193 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 NRTNQ99748 197 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SARGQ9BW04 601 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 MCOLN1Q9GZU1 580 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 AICDAQ9GZX7 198 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 WDR26Q9H7D7 661 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 TRIM45Q9H8W5 580 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 TMEM165Q9HC07 324 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 PRRC2BQ5JSZ5 2229 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 COL4A3Q01955 1670 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 DENND4AQ7Z401 1863 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 KDM4EB2RXH2 506 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 SLC30A4O14863 429 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 EMC8O43402 210 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 HMGN2P05204 90 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 GAAP10253 952 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 IL7P13232 177 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ATP5A1P25705 553 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 TRIM23P36406 574 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 BCL6P41182 706 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 IL12RB1P42701 662 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 HTR3AP46098 478 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SLAMF1Q13291 335 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GPR19Q15760 415 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ZNF79Q15937 498 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 CARTPTQ16568 116 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GLYR1Q49A26 553 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 FAM78AQ5JUQ0 283 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 RSBN1Q5VWQ0 802 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 ABHD17CQ6PCB6 329 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 PAQR6Q6TCH4 344 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ZNF517Q6ZMY9 492 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 RAB43Q86YS6 212 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 LAX1Q8IWV1 398 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SMG7Q92540 1137 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 UFD1Q92890 307 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 UCN3Q969E3 161 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 MS4A6EQ96DS6 147 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 RNFT2Q96EX2 444 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 GPA33Q99795 319 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 COQ7Q99807 217 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 RMI1Q9H9A7 625 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 GIMAP4Q9NUV9 329 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 OBP2AQ9NY56 170 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 ZNF221Q9UK13 617 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SLC13A4Q9UKG4 626 aa13.45□□□□□ -0.26
CD48-201ENST00000368045 SPIN1Q9Y657 262 aaPredicted RBP13.45□□□□□ -0.26
CD48-201ENST00000368045 A0A087WUU8 490 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 WWP2O00308 870 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 RGS13O14921 159 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 ALPPP05187 535 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 FGF9P31371 208 aaPredicted RBP13.44□□□□□ -0.26
CD48-201ENST00000368045 GABRA5P31644 462 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 DRD3P35462 400 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 STAT5AP42229 794 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 PRKAG1P54619 331 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 TAS2R41P59536 307 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 LASP1Q14847 261 aaKnown RBP13.44□□□□□ -0.26
CD48-201ENST00000368045 MLF2Q15773 248 aaPredicted RBP13.44□□□□□ -0.26
CD48-201ENST00000368045 GPAT3Q53EU6 434 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 DDI2Q5TDH0 399 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 QSOX2Q6ZRP7 698 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 KIF18BQ86Y91 864 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 ACOT4Q8N9L9 421 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 TOR1AIP2Q8NFQ8 470 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 RFKQ969G6 155 aa13.44□□□□□ -0.26
CD48-201ENST00000368045 ASB16Q96NS5 453 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms